| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901152
Identifier: 159901152
GI number: 159901152
Start: 5928541
End: 5928957
Strand: Direct
Name: 159901152
Synonym: Haur_4640
Alternate gene names: NA
Gene position: 5928541-5928957 (Clockwise)
Preceding gene: 159901148
Following gene: 159901162
Centisome position: 93.41
GC content: 45.56
Gene sequence:
>417_bases GTGGTTGTTCAATTTAGTTTGCCATTACCACCATCAATCAACAGCCAATATGTGACGGTTGGTAATCGCCGTGTGCTCAG CCGCGAAGCCCAAGCTTTCAAACGTCAAGTCAAACGCCAACTAGCGCTTTTACAACAACGCGATACGATCTCGGAGCAAT TTCTGGCGCTAGCTCATCAAGGTTATATTGCGCTATTCCTCGATTTCTATTTTGAAACGCCGCTGCGCCGCGATCTCGAT GGCGGCCTCAAAATAACCCAAGATAGTATTTGCACCAGCCTTGGAATTAACGATAATCGGGTTGTCGATATTCATCTGGT CAAACGGATTGACCCGTTACATCCACGCTTAGAAGTTGAATTGGAAGCGCTCAGCGATTGGCAATTTGAACATGATCGCC AAGTATTGATTAAATAA
Upstream 100 bases:
>100_bases TAGGCTATTCGATTAAATTTTTAATCAAATAACACAAATGTTTGGCAAGCATGTGCTATACTAAGCTTGTGTTTGCATTT GATGTTGTTTGGAGGGGCAT
Downstream 100 bases:
>100_bases GCTAAAACCAAAACCCCGCTCACGTGAGCGGGGTTTTGGTTTGGTTGAAATTGTCGTTTAGATCCGCGTCATTTCGCGGC GAACCCGTATAACGTGAACG
Product: endodeoxyribonuclease RusA
Products: NA
Alternate protein names: Crossover Junction Endodeoxyribonuclease RusA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MVVQFSLPLPPSINSQYVTVGNRRVLSREAQAFKRQVKRQLALLQQRDTISEQFLALAHQGYIALFLDFYFETPLRRDLD GGLKITQDSICTSLGINDNRVVDIHLVKRIDPLHPRLEVELEALSDWQFEHDRQVLIK
Sequences:
>Translated_138_residues MVVQFSLPLPPSINSQYVTVGNRRVLSREAQAFKRQVKRQLALLQQRDTISEQFLALAHQGYIALFLDFYFETPLRRDLD GGLKITQDSICTSLGINDNRVVDIHLVKRIDPLHPRLEVELEALSDWQFEHDRQVLIK >Mature_138_residues MVVQFSLPLPPSINSQYVTVGNRRVLSREAQAFKRQVKRQLALLQQRDTISEQFLALAHQGYIALFLDFYFETPLRRDLD GGLKITQDSICTSLGINDNRVVDIHLVKRIDPLHPRLEVELEALSDWQFEHDRQVLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16011; Mature: 16011
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVQFSLPLPPSINSQYVTVGNRRVLSREAQAFKRQVKRQLALLQQRDTISEQFLALAHQ CEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYIALFLDFYFETPLRRDLDGGLKITQDSICTSLGINDNRVVDIHLVKRIDPLHPRLEVE CHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEE LEALSDWQFEHDRQVLIK EEECCCCCCCCCCEEECC >Mature Secondary Structure MVVQFSLPLPPSINSQYVTVGNRRVLSREAQAFKRQVKRQLALLQQRDTISEQFLALAHQ CEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYIALFLDFYFETPLRRDLDGGLKITQDSICTSLGINDNRVVDIHLVKRIDPLHPRLEVE CHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEE LEALSDWQFEHDRQVLIK EEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA