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The map label for this gene is 159901127

Identifier: 159901127

GI number: 159901127

Start: 5901507

End: 5902412

Strand: Direct

Name: 159901127

Synonym: Haur_4615

Alternate gene names: NA

Gene position: 5901507-5902412 (Clockwise)

Preceding gene: 159901126

Following gene: 159901128

Centisome position: 92.99

GC content: 48.9

Gene sequence:

>906_bases
ATGCCCTTACTTATTGGACTCGTTGTACTAGTGATTGTCTTTGGGGTTGGCTTTATGGTGCTCAACCAACGCCGCCAAAC
TGATACGGTCTCTAGTCGGTTGGCGCAATTTACTGAGCGCTCCATGAACCTTGAAGATCTGGAGTTGCAGTTGCCGTTTA
TGCAGCGGGTTGTAACCCCCATGCTGAACAATGTGTTTGTCAAGCTTGGTCAATCGGGCAAAGGCAACGATAAACTGCGT
AATAATCTCATGCTGGCTGGTAATCCTGGTAATTTAACGCCAACGATGTTTACTGGGATGCGGATTTTTATGGCCCTAGC
GCTGTTTGGGGTCATCTTTTTAATCTGTATGCTGGCCAAAGTGCAAACTCTCAGCGCAATTCAATGGTCGGGGGTTGGCG
GAGCTTTGGGCTTTTTGCTTCCAGCTATGTGGCTTGGTCGTCAAATTAAAAAGCGCCAGAAGTTGATTCTTAAGGCGTTG
CCCGATGCGCTCGATTTGCTTTCGATCAGTGTTACTGCTGGTTTAGGCTTCGATGCTGCACTCCAACGGGTGGCTGAAAA
ATGGGATAACGAGTTGTGCCGCGAGTTCCGCCGGGCGCTCTCCGATATTCGTTTGGGTACCCAACGCCATGAAGCATTTC
GCTCAATGACTGTACGAACTGGGGTTGAAGACTTAACCTCGTTTGTTTCGGCGGTTATTCAAGCCGACCAACTTGGGGTG
AGCATGGGCAAAATGCTCAAAATTCAATCTGACCAATTGCGGTTGCGCCGTCGTCAACGTGCCGAAGAAGAAGCTCAAAA
AGCTCCAATTAAGATGCTCTTTCCATTGGTGTTCTTGATCTTCCCTTCGATGTTCGTGGTTATCTTGGGGCCAGCTATTC
CACGTTTGCTTGGTGGTGGTCTCTAG

Upstream 100 bases:

>100_bases
TGCTTGGTGTTGTATGCCCGTATGTAGCGCAATGATGATGATTGGAGGGTTCTTCGCAATCAAAAGCATTGTTAATATTG
AAATCTAAAGGGAGTTTGTT

Downstream 100 bases:

>100_bases
TGTCGCAACACGCTATTCGTAATCTAACGCGCAATAGCAGCTTGGTTGAATACGCTGAGTTTGCTAATAGCTTTTTGAGC
CGTGGTATGGGCCTGATGGG

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; Type II Secretion System Protein F Domain Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Tight Adherence TadC-Related Transmembrane Protein; TadC Pilus Assembly Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Flp Pilus Assembly Protein TadB; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Type II Secretion System Protein Subunit F; Type II Secretion System F Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPLLIGLVVLVIVFGVGFMVLNQRRQTDTVSSRLAQFTERSMNLEDLELQLPFMQRVVTPMLNNVFVKLGQSGKGNDKLR
NNLMLAGNPGNLTPTMFTGMRIFMALALFGVIFLICMLAKVQTLSAIQWSGVGGALGFLLPAMWLGRQIKKRQKLILKAL
PDALDLLSISVTAGLGFDAALQRVAEKWDNELCREFRRALSDIRLGTQRHEAFRSMTVRTGVEDLTSFVSAVIQADQLGV
SMGKMLKIQSDQLRLRRRQRAEEEAQKAPIKMLFPLVFLIFPSMFVVILGPAIPRLLGGGL

Sequences:

>Translated_301_residues
MPLLIGLVVLVIVFGVGFMVLNQRRQTDTVSSRLAQFTERSMNLEDLELQLPFMQRVVTPMLNNVFVKLGQSGKGNDKLR
NNLMLAGNPGNLTPTMFTGMRIFMALALFGVIFLICMLAKVQTLSAIQWSGVGGALGFLLPAMWLGRQIKKRQKLILKAL
PDALDLLSISVTAGLGFDAALQRVAEKWDNELCREFRRALSDIRLGTQRHEAFRSMTVRTGVEDLTSFVSAVIQADQLGV
SMGKMLKIQSDQLRLRRRQRAEEEAQKAPIKMLFPLVFLIFPSMFVVILGPAIPRLLGGGL
>Mature_300_residues
PLLIGLVVLVIVFGVGFMVLNQRRQTDTVSSRLAQFTERSMNLEDLELQLPFMQRVVTPMLNNVFVKLGQSGKGNDKLRN
NLMLAGNPGNLTPTMFTGMRIFMALALFGVIFLICMLAKVQTLSAIQWSGVGGALGFLLPAMWLGRQIKKRQKLILKALP
DALDLLSISVTAGLGFDAALQRVAEKWDNELCREFRRALSDIRLGTQRHEAFRSMTVRTGVEDLTSFVSAVIQADQLGVS
MGKMLKIQSDQLRLRRRQRAEEEAQKAPIKMLFPLVFLIFPSMFVVILGPAIPRLLGGGL

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33459; Mature: 33327

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLIGLVVLVIVFGVGFMVLNQRRQTDTVSSRLAQFTERSMNLEDLELQLPFMQRVVTP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECHHHHHHHHH
MLNNVFVKLGQSGKGNDKLRNNLMLAGNPGNLTPTMFTGMRIFMALALFGVIFLICMLAK
HHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQTLSAIQWSGVGGALGFLLPAMWLGRQIKKRQKLILKALPDALDLLSISVTAGLGFDAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LQRVAEKWDNELCREFRRALSDIRLGTQRHEAFRSMTVRTGVEDLTSFVSAVIQADQLGV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SMGKMLKIQSDQLRLRRRQRAEEEAQKAPIKMLFPLVFLIFPSMFVVILGPAIPRLLGGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure 
PLLIGLVVLVIVFGVGFMVLNQRRQTDTVSSRLAQFTERSMNLEDLELQLPFMQRVVTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECHHHHHHHHH
MLNNVFVKLGQSGKGNDKLRNNLMLAGNPGNLTPTMFTGMRIFMALALFGVIFLICMLAK
HHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQTLSAIQWSGVGGALGFLLPAMWLGRQIKKRQKLILKALPDALDLLSISVTAGLGFDAA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LQRVAEKWDNELCREFRRALSDIRLGTQRHEAFRSMTVRTGVEDLTSFVSAVIQADQLGV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SMGKMLKIQSDQLRLRRRQRAEEEAQKAPIKMLFPLVFLIFPSMFVVILGPAIPRLLGGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA