| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901128
Identifier: 159901128
GI number: 159901128
Start: 5902412
End: 5902774
Strand: Direct
Name: 159901128
Synonym: Haur_4616
Alternate gene names: NA
Gene position: 5902412-5902774 (Clockwise)
Preceding gene: 159901127
Following gene: 159901135
Centisome position: 93.0
GC content: 47.66
Gene sequence:
>363_bases GTGTCGCAACACGCTATTCGTAATCTAACGCGCAATAGCAGCTTGGTTGAATACGCTGAGTTTGCTAATAGCTTTTTGAG CCGTGGTATGGGCCTGATGGGGCGCAAGCACTTGCCTGCCAATACAGGCTTAATTCTCTATCCCAATAATAATATTCATA TGTTCTTTATGCGCTTTGCGATTGATGTGATCTTTGTTGATCGACAGCATCAGGTGGTGGGGCTGCGCGAGAACTTTAAG CCCTGGCGGCCATTTGCTGGCGCAGCCAAGGCCCGTTATACCCTCGAATTGCCAGTTGGGGTTATTCAACAATCCCAAAC CCAACTCGGCGATCAATTAGCAGTTGTTCCTGCTATTTTCTAA
Upstream 100 bases:
>100_bases CAATTAAGATGCTCTTTCCATTGGTGTTCTTGATCTTCCCTTCGATGTTCGTGGTTATCTTGGGGCCAGCTATTCCACGT TTGCTTGGTGGTGGTCTCTA
Downstream 100 bases:
>100_bases GGTATAGCCCTAGCAAAACCCCAAGCTTGCTAGGGCTATTCAATCAACATTTCAACTCCATAGACTTTGCGAAATAGATT GGTTTTGCGATTCGCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFK PWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF
Sequences:
>Translated_120_residues MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFK PWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF >Mature_119_residues SQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFAIDVIFVDRQHQVVGLRENFKP WRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0127 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003795 - InterPro: IPR022906 [H]
Pfam domain/function: PF02643 DUF192 [H]
EC number: NA
Molecular weight: Translated: 13603; Mature: 13472
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFA CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHH IDVIFVDRQHQVVGLRENFKPWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure SQHAIRNLTRNSSLVEYAEFANSFLSRGMGLMGRKHLPANTGLILYPNNNIHMFFMRFA CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHH IDVIFVDRQHQVVGLRENFKPWRPFAGAAKARYTLELPVGVIQQSQTQLGDQLAVVPAIF EEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]