Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901120

Identifier: 159901120

GI number: 159901120

Start: 5893374

End: 5893934

Strand: Direct

Name: 159901120

Synonym: Haur_4608

Alternate gene names: NA

Gene position: 5893374-5893934 (Clockwise)

Preceding gene: 159901119

Following gene: 159901121

Centisome position: 92.86

GC content: 47.24

Gene sequence:

>561_bases
ATGATTGTTGGACGCTTGCCTGATGTGCCACTCGATGCCGATTTGCCAATAAGCGCGAGCCTGATCTCTCAAGGATTAGA
ACATTATCAAGCAGTAGCCCGCTGGATTGCCACGCTACCTTTTGGGCGCAATACCAACCCACTCGATTGGCGCTTGGTCT
TGAGCGAAAAACGTGGTACCAGCAGCACCAAACATGCCTTCTTGGCCGAGTTGGCCCGCGAATTAGCCTTGCCAATTAAT
TTATATTTCGGGATTTATCTAATGGATGGCAAGAATACGCCAGGTGTGGGTGAAACTCTTGCTTCGAATAATTTACCCTC
GATTCCTGAAGCCCATTGTTTTTTACGCTATGGCCGTTGGAACATTGATGTAACGCGCTCACCAAAGGCTGAGCCAATTT
TGCAATTTTTTGAAGAGCAACAGATTAATTCTGAGCAAATTGGCGATTTCAAACGAACTGTTCATCGTAATTTTCTCTTG
AAATGGGCTACCAGCCAAGGGCTAAGCCTCACCAAAGCCTGGGCGATTCGCGAGGCCTGTATGGCTGCATTAAGCCAATG
A

Upstream 100 bases:

>100_bases
AAGGGCTTGGCTACTACCGCTGGGGGCGGGTTCGCCAACAACAACTTTGCGATCGTGAAGCAAGTCCGGTTATCGCCACA
TATTCAATGGAGATGATGTC

Downstream 100 bases:

>100_bases
GCGCCTGCTTGCCGTCAAATTTTGCTTGGCCTCAAACCAGCCAGCAATTTGGCGGGTTAAGGGTGCTTATGCCCCAACCA
AGCCCCAGTCAGATGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN
LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL
KWATSQGLSLTKAWAIREACMAALSQ

Sequences:

>Translated_186_residues
MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN
LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL
KWATSQGLSLTKAWAIREACMAALSQ
>Mature_186_residues
MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGTSSTKHAFLAELARELALPIN
LYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRWNIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLL
KWATSQGLSLTKAWAIREACMAALSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20863; Mature: 20863

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
SSTKHAFLAELARELALPINLYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRW
CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHEEEECCE
NIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLLKWATSQGLSLTKAWAIREAC
EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
MAALSQ
HHHHCC
>Mature Secondary Structure
MIVGRLPDVPLDADLPISASLISQGLEHYQAVARWIATLPFGRNTNPLDWRLVLSEKRGT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
SSTKHAFLAELARELALPINLYFGIYLMDGKNTPGVGETLASNNLPSIPEAHCFLRYGRW
CHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCHHHEEEECCE
NIDVTRSPKAEPILQFFEEQQINSEQIGDFKRTVHRNFLLKWATSQGLSLTKAWAIREAC
EEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
MAALSQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA