| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is ada [H]
Identifier: 159901119
GI number: 159901119
Start: 5892841
End: 5893377
Strand: Direct
Name: ada [H]
Synonym: Haur_4607
Alternate gene names: 159901119
Gene position: 5892841-5893377 (Clockwise)
Preceding gene: 159901118
Following gene: 159901120
Centisome position: 92.85
GC content: 48.98
Gene sequence:
>537_bases ATGCCCGTAGAGTATTGTATTCAAACCAGCCCGTTTGGGCGTTTGCTGCTGGCGGCTGCGTCCGAGGGGTTGTTGTTGGC CAGTTTTGCCGATGATGATAGTGAGTTGTTGGCTGAATTAACCGAAGCCTACCCCGAACGCTTGTTGCTCTATCGCTCAA ATACATTGCTTGACCAAGCATTTTATCAATATCAGGCCTATTTTTCGGGCCAACGCCAGCAATTTGCATTACCAATTGCC TGGCATGGCTCGGCGCAGCAGCAAGCAATTTGGCAACAAATAATCCAAATTCCCTTTGGTCAGCAATGGTCATATCAACA GCTTGCCCAAACGTTGCCAACGCCGTATCAAGCTGCTCATGCGATCAATCAAGCCTTGCGCCATAATCCTTTAGCATTAA TTATTCCCTGCCATCGTTTATCCAATTCGCCGCAAGGGCTTGGCTACTACCGCTGGGGGCGGGTTCGCCAACAACAACTT TGCGATCGTGAAGCAAGTCCGGTTATCGCCACATATTCAATGGAGATGATGTCATGA
Upstream 100 bases:
>100_bases GTTAATGGTGATGGTGTTGCTTCACGCACCGTTCAAGTAAGCCTGCGGGTGGTTGATCAGCTTCAGCCCATCTATTTGCC GCTGACTAGAAAATAGCATT
Downstream 100 bases:
>100_bases TTGTTGGACGCTTGCCTGATGTGCCACTCGATGCCGATTTGCCAATAAGCGCGAGCCTGATCTCTCAAGGATTAGAACAT TATCAAGCAGTAGCCCGCTG
Product: methylated-DNA--protein-cysteine methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPVEYCIQTSPFGRLLLAAASEGLLLASFADDDSELLAELTEAYPERLLLYRSNTLLDQAFYQYQAYFSGQRQQFALPIA WHGSAQQQAIWQQIIQIPFGQQWSYQQLAQTLPTPYQAAHAINQALRHNPLALIIPCHRLSNSPQGLGYYRWGRVRQQQL CDREASPVIATYSMEMMS
Sequences:
>Translated_178_residues MPVEYCIQTSPFGRLLLAAASEGLLLASFADDDSELLAELTEAYPERLLLYRSNTLLDQAFYQYQAYFSGQRQQFALPIA WHGSAQQQAIWQQIIQIPFGQQWSYQQLAQTLPTPYQAAHAINQALRHNPLALIIPCHRLSNSPQGLGYYRWGRVRQQQL CDREASPVIATYSMEMMS >Mature_177_residues PVEYCIQTSPFGRLLLAAASEGLLLASFADDDSELLAELTEAYPERLLLYRSNTLLDQAFYQYQAYFSGQRQQFALPIAW HGSAQQQAIWQQIIQIPFGQQWSYQQLAQTLPTPYQAAHAINQALRHNPLALIIPCHRLSNSPQGLGYYRWGRVRQQQLC DREASPVIATYSMEMMS
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=166, Percent_Identity=28.9156626506024, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1788542, Length=169, Percent_Identity=35.5029585798817, Blast_Score=99, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 20313; Mature: 20182
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVEYCIQTSPFGRLLLAAASEGLLLASFADDDSELLAELTEAYPERLLLYRSNTLLDQA CCCCCEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHEEHHHCCHHHHHH FYQYQAYFSGQRQQFALPIAWHGSAQQQAIWQQIIQIPFGQQWSYQQLAQTLPTPYQAAH HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH AINQALRHNPLALIIPCHRLSNSPQGLGYYRWGRVRQQQLCDREASPVIATYSMEMMS HHHHHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCC >Mature Secondary Structure PVEYCIQTSPFGRLLLAAASEGLLLASFADDDSELLAELTEAYPERLLLYRSNTLLDQA CCCCEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHEEHHHCCHHHHHH FYQYQAYFSGQRQQFALPIAWHGSAQQQAIWQQIIQIPFGQQWSYQQLAQTLPTPYQAAH HHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHH AINQALRHNPLALIIPCHRLSNSPQGLGYYRWGRVRQQQLCDREASPVIATYSMEMMS HHHHHHHCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]