| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gsiC [H]
Identifier: 159901114
GI number: 159901114
Start: 5885217
End: 5886179
Strand: Reverse
Name: gsiC [H]
Synonym: Haur_4602
Alternate gene names: 159901114
Gene position: 5886179-5885217 (Counterclockwise)
Preceding gene: 159901129
Following gene: 159901113
Centisome position: 92.75
GC content: 49.01
Gene sequence:
>963_bases ATGAGCCGACTCTTACTTCGCAAACTTGCGTTGTTGATCGTGTTAGTGCCGGCATTACACTTTTTAGGGGCGTGGTATGC CTATCGTCAACAGGGCTTTTTTTATCCACCCAAAGAAGTGTCAACTCAAACAGGCAATGGATTTGATGTATCGTATGAGA TTGATGATCGTCCATTTATAACCCATTATCGTGGCGTGATTAGCGCCATGATCGATGGCGATTTGGGGCGGATTGAACGG ACGAAAGTCGCTGAATATATCGATGATTTTATTGTCCGTTCGGCGCAATTGTTGGGCGTGGCATTTCTCGCAACGATCGT TCTTGGCCTGGGGATGTGCTTGTTGTCCATTTCGCCGCGCACTGGGCGGGTCTCGCCGACAATGGTCACAATCTTTACCT TGGGCAATGGCATCCCTGGCTTTTTCTTGGGCACACTGTTAGTTTTAGGGTTGCTCTATGTCAAACGAGTTGGCTGGACC AACCAAGTGCTCTTGCCAGTGCAAGGCTATAGCACCTCCAAACATCTGATTTTGCCAGCATTAACCTTGGCTTTGCGTCC GGCGTTTTATATTGCCTCGATTGGTGCGAGCTTGCTCGAACATGAATTTCAGCAAGATTATGTGCGAGTTGCCAAAAGTA AAGGCTTGCGCTGGCGCACAATCGTCCGTCGCCATGCCATCCCCAATGTTGCGCCGGCGGTATTTGCTAGCTTAGGCCGT GGCCTACAGATGGTGGTTGGTAGCTTAATTTTGGTCGAAGCGTTGTTCGATTGGCGCGGTACAGGTTGGATGTTATTCAA TACCCTGACCAATTCGCGCTCAATTACTTTTTTCAACCCCTTGATTTTGGCTTTACTGCTGGCCATGACTGGCGCTATTT TGATTTTGGTCGATTTACTAGCCTCGATGCTGAGCTTATGGATCAACCCGCTTGGGCGGCAAGCTAGTGTAGGGAGAGGC TAA
Upstream 100 bases:
>100_bases CGCCAAGCTCAGTCGTAAGGCTGAACCTTTCGTTAAGCGAATGAGTAATATACATAACACCTCAACGCTCATTCCTCAGG GCCAATTGGAGATTAGAACT
Downstream 100 bases:
>100_bases TGTTTAAAAATCTGCCATTGACCTTTGGTTTAAGCATTGTTGGCTTGATGCTGCTAATTGCGATCTTCGGCCCAAGCCTT GCTCCCCATGATCCAGTCGA
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSRLLLRKLALLIVLVPALHFLGAWYAYRQQGFFYPPKEVSTQTGNGFDVSYEIDDRPFITHYRGVISAMIDGDLGRIER TKVAEYIDDFIVRSAQLLGVAFLATIVLGLGMCLLSISPRTGRVSPTMVTIFTLGNGIPGFFLGTLLVLGLLYVKRVGWT NQVLLPVQGYSTSKHLILPALTLALRPAFYIASIGASLLEHEFQQDYVRVAKSKGLRWRTIVRRHAIPNVAPAVFASLGR GLQMVVGSLILVEALFDWRGTGWMLFNTLTNSRSITFFNPLILALLLAMTGAILILVDLLASMLSLWINPLGRQASVGRG
Sequences:
>Translated_320_residues MSRLLLRKLALLIVLVPALHFLGAWYAYRQQGFFYPPKEVSTQTGNGFDVSYEIDDRPFITHYRGVISAMIDGDLGRIER TKVAEYIDDFIVRSAQLLGVAFLATIVLGLGMCLLSISPRTGRVSPTMVTIFTLGNGIPGFFLGTLLVLGLLYVKRVGWT NQVLLPVQGYSTSKHLILPALTLALRPAFYIASIGASLLEHEFQQDYVRVAKSKGLRWRTIVRRHAIPNVAPAVFASLGR GLQMVVGSLILVEALFDWRGTGWMLFNTLTNSRSITFFNPLILALLLAMTGAILILVDLLASMLSLWINPLGRQASVGRG >Mature_319_residues SRLLLRKLALLIVLVPALHFLGAWYAYRQQGFFYPPKEVSTQTGNGFDVSYEIDDRPFITHYRGVISAMIDGDLGRIERT KVAEYIDDFIVRSAQLLGVAFLATIVLGLGMCLLSISPRTGRVSPTMVTIFTLGNGIPGFFLGTLLVLGLLYVKRVGWTN QVLLPVQGYSTSKHLILPALTLALRPAFYIASIGASLLEHEFQQDYVRVAKSKGLRWRTIVRRHAIPNVAPAVFASLGRG LQMVVGSLILVEALFDWRGTGWMLFNTLTNSRSITFFNPLILALLLAMTGAILILVDLLASMLSLWINPLGRQASVGRG
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=260, Percent_Identity=26.5384615384615, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787497, Length=285, Percent_Identity=25.9649122807018, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787550, Length=306, Percent_Identity=22.8758169934641, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789965, Length=292, Percent_Identity=23.972602739726, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35321; Mature: 35190
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLLRKLALLIVLVPALHFLGAWYAYRQQGFFYPPKEVSTQTGNGFDVSYEIDDRPFI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCHH THYRGVISAMIDGDLGRIERTKVAEYIDDFIVRSAQLLGVAFLATIVLGLGMCLLSISPR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGRVSPTMVTIFTLGNGIPGFFLGTLLVLGLLYVKRVGWTNQVLLPVQGYSTSKHLILPA CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH LTLALRPAFYIASIGASLLEHEFQQDYVRVAKSKGLRWRTIVRRHAIPNVAPAVFASLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC GLQMVVGSLILVEALFDWRGTGWMLFNTLTNSRSITFFNPLILALLLAMTGAILILVDLL CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ASMLSLWINPLGRQASVGRG HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRLLLRKLALLIVLVPALHFLGAWYAYRQQGFFYPPKEVSTQTGNGFDVSYEIDDRPFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEECCCCHH THYRGVISAMIDGDLGRIERTKVAEYIDDFIVRSAQLLGVAFLATIVLGLGMCLLSISPR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGRVSPTMVTIFTLGNGIPGFFLGTLLVLGLLYVKRVGWTNQVLLPVQGYSTSKHLILPA CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH LTLALRPAFYIASIGASLLEHEFQQDYVRVAKSKGLRWRTIVRRHAIPNVAPAVFASLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCC GLQMVVGSLILVEALFDWRGTGWMLFNTLTNSRSITFFNPLILALLLAMTGAILILVDLL CHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ASMLSLWINPLGRQASVGRG HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA