| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901082
Identifier: 159901082
GI number: 159901082
Start: 5848002
End: 5848637
Strand: Reverse
Name: 159901082
Synonym: Haur_4570
Alternate gene names: NA
Gene position: 5848637-5848002 (Counterclockwise)
Preceding gene: 159901084
Following gene: 159901081
Centisome position: 92.15
GC content: 46.54
Gene sequence:
>636_bases ATGCGTTATTTGTATAGTCATGGCTTCGCTTCGGGGCCAAATTCGCAAAAAGCAACATGGTTGGCCCAGCAATTTGCGGC CCATGGTCATGAATTATTGATTCCCGATTTGAACCGACCGTCGTTTGAGCACTTAACCATCAGTGACCAAATTGATTATC TTCAGCAATTAATTACGGTTTCAAGCGAGCCATGGTGTTTGCTTGGTTCGAGTTTAGGGGGCTTGGTAGCATTGCAGGCA GCCGCAATGATTCCGCAAATCGAGCGTTTAATCTTATTGGCTCCTGCGCTCTATTTTGCCCAAAATCGGCGGTTGATGCT CGGTGAAGCAACCCTCAAGCAATGGCAAGCTAGCGGTTGGCTTGAATATTACAATTATCGTGATCACGCTCCACGAGCAG TACATTATGGTTTAATTGAAGATGCTGAGGCCTACAATAGCGATAATTTCTCACGCAATATGCCGATTTTGATTGTGCAT GGCACTGAAGATGAGAGTGTCAGCCACACCCAAAGCCAGCGGTTTGCTCAACCGCGCAATTATGTCACTCTGCACACTCC CGCTTGGGATCATGGTATGGTTGGGCATGTCGCTGAGTTGTGGGCGTTAATTGAATCTCAGCTATTCAATCAATAA
Upstream 100 bases:
>100_bases CGCGTCGTGCGACGGATCGTGTAATCATTATACAACTGTTCAGAAATATCCCCCGCATGCTTTAGAATACTGCGCAGAAT GAGCCTGCCGAGGAATATCA
Downstream 100 bases:
>100_bases AGCATGTTGAGCCACGCAGAACACGAAATAATGAATCTTAGCGGTTCTTTGCGCCCTTCGTGGTTCAATTTCATCATTCA ATCTCTGCGCCTCGGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRYLYSHGFASGPNSQKATWLAQQFAAHGHELLIPDLNRPSFEHLTISDQIDYLQQLITVSSEPWCLLGSSLGGLVALQA AAMIPQIERLILLAPALYFAQNRRLMLGEATLKQWQASGWLEYYNYRDHAPRAVHYGLIEDAEAYNSDNFSRNMPILIVH GTEDESVSHTQSQRFAQPRNYVTLHTPAWDHGMVGHVAELWALIESQLFNQ
Sequences:
>Translated_211_residues MRYLYSHGFASGPNSQKATWLAQQFAAHGHELLIPDLNRPSFEHLTISDQIDYLQQLITVSSEPWCLLGSSLGGLVALQA AAMIPQIERLILLAPALYFAQNRRLMLGEATLKQWQASGWLEYYNYRDHAPRAVHYGLIEDAEAYNSDNFSRNMPILIVH GTEDESVSHTQSQRFAQPRNYVTLHTPAWDHGMVGHVAELWALIESQLFNQ >Mature_211_residues MRYLYSHGFASGPNSQKATWLAQQFAAHGHELLIPDLNRPSFEHLTISDQIDYLQQLITVSSEPWCLLGSSLGGLVALQA AAMIPQIERLILLAPALYFAQNRRLMLGEATLKQWQASGWLEYYNYRDHAPRAVHYGLIEDAEAYNSDNFSRNMPILIVH GTEDESVSHTQSQRFAQPRNYVTLHTPAWDHGMVGHVAELWALIESQLFNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23945; Mature: 23945
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLYSHGFASGPNSQKATWLAQQFAAHGHELLIPDLNRPSFEHLTISDQIDYLQQLITV CCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHC SSEPWCLLGSSLGGLVALQAAAMIPQIERLILLAPALYFAQNRRLMLGEATLKQWQASGW CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC LEYYNYRDHAPRAVHYGLIEDAEAYNSDNFSRNMPILIVHGTEDESVSHTQSQRFAQPRN HHCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCC YVTLHTPAWDHGMVGHVAELWALIESQLFNQ EEEEECCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRYLYSHGFASGPNSQKATWLAQQFAAHGHELLIPDLNRPSFEHLTISDQIDYLQQLITV CCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHC SSEPWCLLGSSLGGLVALQAAAMIPQIERLILLAPALYFAQNRRLMLGEATLKQWQASGW CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCC LEYYNYRDHAPRAVHYGLIEDAEAYNSDNFSRNMPILIVHGTEDESVSHTQSQRFAQPRN HHCCCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCC YVTLHTPAWDHGMVGHVAELWALIESQLFNQ EEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA