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The map label for this gene is glpC [H]

Identifier: 159901073

GI number: 159901073

Start: 5837361

End: 5838722

Strand: Reverse

Name: glpC [H]

Synonym: Haur_4561

Alternate gene names: 159901073

Gene position: 5838722-5837361 (Counterclockwise)

Preceding gene: 159901078

Following gene: 159901070

Centisome position: 92.0

GC content: 52.79

Gene sequence:

>1362_bases
ATGGATGATCGATTATCAATCAGGCTGGAGCAATCACTCGATTTTTGTATTAAATGTAATATTTGTACTACCGCATGTCC
GGTGGCAGCGGTCACCGATCAGTTTCCTGGCCCCAAGTATGTCGGGCCGCAAGCTGGGCGTTTTCGCCACGATCAAGCTG
AGCATTCACCCGATCATTCGGTGGATTATTGCTCGGGCTGTCGAGTTTGCAACGAGGTTTGCCCAACTGGCGTGCCAATC
GCTGAACTCAATGCCCGTGCCCGCGCACAGATGGTGCGCGAACATGGCTTGCCCTTGCGCAACCGCATGCTTGGGCGCTC
GGAGTTACTGGGCATGCTGGGCACACCCTTCGCCCCGCTAGCCAACTGGACAATGAGCAATCGGCCAATTCGTTGGCTAA
TTGAAAAATTATTTAAGATCGATAGGCGTGCGCCGCTGCCCCAGTGGGCTGGCTATACCTTGCGCGGCTGGGCACGCAAA
CATCTGCCGCGTGCTGCCACGCCGTTGCGCTGGACCTATGGCCTGCGTTCATGGCTCAGCCGCACTGCACTTGTGCCACT
TGAGCAACGTCGTTTGGTGCAAACTCAAACTCAAAAACCAGCAACTTCGACAATTTCGCGCAAAGTCGTTTATTTTCATG
GTTGCTCAACCAATTATTATGAGCCACATGTTGGCAAGGCTGCCCTAGAAGTGCTGACCCGCAATGGTTGCGAGGTGGTG
TTGGCTAATCAAGGCTGTTGTGGCTTGCCGATGCTTTCCAATGGTGAATTTAAGGCTGCCCGCCGTTATCACGCCGCTAA
TGTCCATGCCTTACTGCCATGGATTCGTCAAGGCTATGTGGTGGTGGGTACTTCGACCAGTTGTACCTTGACCCTCAAAG
ATGAAGCCCCCGAATTGTTGGGCTGGCATGATCCTGAGGTTCAATTGGTGGCCGAACAAACCTACGATATTTTTGAATAT
TTGCGTTTGCTCGACGAGGCAGGCAAATTTGATCGCAACTTGGGCGCAATCGAAGAAACATTGCCCTACCATCCACCTTG
TCAATTAAAAGCCCATCGCATCGGCTTGCCAGCTCGCGATATTTTGGCGCATATTCCAGGTTTGCAAATTGAGCGAAGCC
AAGCAGCCTGTTGTGGAATTGCTGGCACCTATGGCCTAAAAACCGAAAAATACCCAATCGCAATGGATGTGGGTAAACCG
TTGTTTGAATGGGCCAGCCAGCATCCCGCTGATACGGTGCTGTGTGATAGCGAAACTTGTCGCTGGCAAATTAGCCACGG
GACGGGCTTGGCGACCCGTCATCCCGTGGAGCTTTTAGCCGAGGCCTATCGCCGATTTGATCAGCAGCGCCAACTTAGCT
GA

Upstream 100 bases:

>100_bases
TTTGGTACTTTGTCAAGACAACAAACAAACATGACTGTTTTATGATAGAATGCGATTTAGGCCATTCTAAAGCTTTAAAT
CGTAATTGAGGCTTGTCGCT

Downstream 100 bases:

>100_bases
CGCTGGTTTCAACTTTGGCTCGCCATGCCGCATGAACATAGCCACCTTCGCGGTCGGAGTATTCGATTCGTTCAAAGCTT
GAGCGGGCGGCATCAACCTG

Product: sn-glycerol-3-phosphate dehydrogenase subunit C

Products: glycerone phosphate; reduced acceptor

Alternate protein names: G-3-P dehydrogenase [H]

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MDDRLSIRLEQSLDFCIKCNICTTACPVAAVTDQFPGPKYVGPQAGRFRHDQAEHSPDHSVDYCSGCRVCNEVCPTGVPI
AELNARARAQMVREHGLPLRNRMLGRSELLGMLGTPFAPLANWTMSNRPIRWLIEKLFKIDRRAPLPQWAGYTLRGWARK
HLPRAATPLRWTYGLRSWLSRTALVPLEQRRLVQTQTQKPATSTISRKVVYFHGCSTNYYEPHVGKAALEVLTRNGCEVV
LANQGCCGLPMLSNGEFKAARRYHAANVHALLPWIRQGYVVVGTSTSCTLTLKDEAPELLGWHDPEVQLVAEQTYDIFEY
LRLLDEAGKFDRNLGAIEETLPYHPPCQLKAHRIGLPARDILAHIPGLQIERSQAACCGIAGTYGLKTEKYPIAMDVGKP
LFEWASQHPADTVLCDSETCRWQISHGTGLATRHPVELLAEAYRRFDQQRQLS

Sequences:

>Translated_453_residues
MDDRLSIRLEQSLDFCIKCNICTTACPVAAVTDQFPGPKYVGPQAGRFRHDQAEHSPDHSVDYCSGCRVCNEVCPTGVPI
AELNARARAQMVREHGLPLRNRMLGRSELLGMLGTPFAPLANWTMSNRPIRWLIEKLFKIDRRAPLPQWAGYTLRGWARK
HLPRAATPLRWTYGLRSWLSRTALVPLEQRRLVQTQTQKPATSTISRKVVYFHGCSTNYYEPHVGKAALEVLTRNGCEVV
LANQGCCGLPMLSNGEFKAARRYHAANVHALLPWIRQGYVVVGTSTSCTLTLKDEAPELLGWHDPEVQLVAEQTYDIFEY
LRLLDEAGKFDRNLGAIEETLPYHPPCQLKAHRIGLPARDILAHIPGLQIERSQAACCGIAGTYGLKTEKYPIAMDVGKP
LFEWASQHPADTVLCDSETCRWQISHGTGLATRHPVELLAEAYRRFDQQRQLS
>Mature_453_residues
MDDRLSIRLEQSLDFCIKCNICTTACPVAAVTDQFPGPKYVGPQAGRFRHDQAEHSPDHSVDYCSGCRVCNEVCPTGVPI
AELNARARAQMVREHGLPLRNRMLGRSELLGMLGTPFAPLANWTMSNRPIRWLIEKLFKIDRRAPLPQWAGYTLRGWARK
HLPRAATPLRWTYGLRSWLSRTALVPLEQRRLVQTQTQKPATSTISRKVVYFHGCSTNYYEPHVGKAALEVLTRNGCEVV
LANQGCCGLPMLSNGEFKAARRYHAANVHALLPWIRQGYVVVGTSTSCTLTLKDEAPELLGWHDPEVQLVAEQTYDIFEY
LRLLDEAGKFDRNLGAIEETLPYHPPCQLKAHRIGLPARDILAHIPGLQIERSQAACCGIAGTYGLKTEKYPIAMDVGKP
LFEWASQHPADTVLCDSETCRWQISHGTGLATRHPVELLAEAYRRFDQQRQLS

Specific function: Electron transfer protein; may also function as the membrane anchor for the glpAB dimer [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Note=Loosely bound to the cytoplasmic membrane often occurring in vesicles associated with fumarate reductase [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788576, Length=440, Percent_Identity=34.7727272727273, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787977, Length=402, Percent_Identity=22.3880597014925, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR017753
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: 1.1.99.5

Molecular weight: Translated: 50901; Mature: 50901

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRLSIRLEQSLDFCIKCNICTTACPVAAVTDQFPGPKYVGPQAGRFRHDQAEHSPDHS
CCCCEEEEECCCCCEEEECCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDYCSGCRVCNEVCPTGVPIAELNARARAQMVREHGLPLRNRMLGRSELLGMLGTPFAPL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCHHH
ANWTMSNRPIRWLIEKLFKIDRRAPLPQWAGYTLRGWARKHLPRAATPLRWTYGLRSWLS
HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RTALVPLEQRRLVQTQTQKPATSTISRKVVYFHGCSTNYYEPHVGKAALEVLTRNGCEVV
HHCCCCHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE
LANQGCCGLPMLSNGEFKAARRYHAANVHALLPWIRQGYVVVGTSTSCTLTLKDEAPELL
EECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHC
GWHDPEVQLVAEQTYDIFEYLRLLDEAGKFDRNLGAIEETLPYHPPCQLKAHRIGLPARD
CCCCCCEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCCCHHCCCCCHHH
ILAHIPGLQIERSQAACCGIAGTYGLKTEKYPIAMDVGKPLFEWASQHPADTVLCDSETC
HHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEECCCCC
RWQISHGTGLATRHPVELLAEAYRRFDQQRQLS
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDDRLSIRLEQSLDFCIKCNICTTACPVAAVTDQFPGPKYVGPQAGRFRHDQAEHSPDHS
CCCCEEEEECCCCCEEEECCCHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VDYCSGCRVCNEVCPTGVPIAELNARARAQMVREHGLPLRNRMLGRSELLGMLGTPFAPL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCHHH
ANWTMSNRPIRWLIEKLFKIDRRAPLPQWAGYTLRGWARKHLPRAATPLRWTYGLRSWLS
HCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RTALVPLEQRRLVQTQTQKPATSTISRKVVYFHGCSTNYYEPHVGKAALEVLTRNGCEVV
HHCCCCHHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE
LANQGCCGLPMLSNGEFKAARRYHAANVHALLPWIRQGYVVVGTSTSCTLTLKDEAPELL
EECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHC
GWHDPEVQLVAEQTYDIFEYLRLLDEAGKFDRNLGAIEETLPYHPPCQLKAHRIGLPARD
CCCCCCEEEEHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCCCCCCCCCHHCCCCCHHH
ILAHIPGLQIERSQAACCGIAGTYGLKTEKYPIAMDVGKPLFEWASQHPADTVLCDSETC
HHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEECCCCC
RWQISHGTGLATRHPVELLAEAYRRFDQQRQLS
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]