| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yhfW [C]
Identifier: 159901053
GI number: 159901053
Start: 5811859
End: 5812749
Strand: Reverse
Name: yhfW [C]
Synonym: Haur_4541
Alternate gene names: 159901053
Gene position: 5812749-5811859 (Counterclockwise)
Preceding gene: 159901054
Following gene: 159901052
Centisome position: 91.59
GC content: 54.77
Gene sequence:
>891_bases ATGAGCGTGATTGTCTGTTTTATTGATGGGGTTGGTTTGTTGCCGCACGCCGCCGCGCCCTGGACGACCGCCCATCTGCC AACACTCACCAACTTGCTGGGCGATTTACCACACAGTAATTTGCAGATTGAGCAGCCTAATCTCTATTTTCGGGCGATTG ATGCCACTTTGGGGGTGGAGGGCTTGCCGCAAAGTGGCACGGGCCATACCAGTTTATGGACAGGCGTGAATGCTTCGGCC TTGTTGGGACGGCATTATCCAGCCTATCCTGCGCCCTCGCAACGCCCGATGATCGCCGAACAAAGCTTGTTTGCCAAAGT TCAGCAACTTGGCCGAACCAGTCTGATCGCCACCGTCCATCGTGATCGCTATTGGGAGCTAGTCGCCAAGCGTGAGCAAC GGGCAACTGCCGCCGCCCTCGCCGCTCAAGTCGTCGATTTGAACTTGCCTGCTACACCCGAATGGCTGGCTGGTCAAGCA GTGACTTGGGACATTACGGGCTATTATTTGCAACAATGGGGCGCATTGGCGGGCTTGCCCACGATTACTGCCCACGAAGC AGGCTTGCGACTTGGGCAAGCGCTGCGTTTGGCCGATCTGGTGCATTACGAGTGCTATTTGCCCGATTTCGTTGGCCATC GGCGCATTGTTGAAACGCCCGAACATACGCTTGAATTGATCGATACCATGCTTGGGGCGATCATCAGCCAAATGCAACCC AGCGATAGTTTGATTCTGGTTAGCGATCATGGCAACCTTGAGATGATCGAGCACACCAGCCATAGCCGCAATCCTGTGCC GCTGTTGGTAGTTGGAGCCAAGGCCCAAGCCGCAGCCAAAGTCGAAGATATTAGCCAGATCACGCCCTTGATTCTGGATC TATTAATCTAG
Upstream 100 bases:
>100_bases TCAGCGCTGGCGGCGATTCGCATGGCCCGCGTGATCCTTTCAGCCCACAGCCAGCCGCACGTTGTCGCGATCTTTTGGCT CGTTTTGGAATTGATGTGTT
Downstream 100 bases:
>100_bases CGCTATAATAGCGGTACTTGCTCAGATCCAGCTTATTTTTCGAAGGAGCAAACCCGATGCAATGGTTAAACGAACCGCAA CAATGGTCATTCAGCGATGA
Product: metalloenzyme domain-containing protein
Products: NA
Alternate protein names: Metallo Domain Protein; Metallo; Metallo Superfamily Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSVIVCFIDGVGLLPHAAAPWTTAHLPTLTNLLGDLPHSNLQIEQPNLYFRAIDATLGVEGLPQSGTGHTSLWTGVNASA LLGRHYPAYPAPSQRPMIAEQSLFAKVQQLGRTSLIATVHRDRYWELVAKREQRATAAALAAQVVDLNLPATPEWLAGQA VTWDITGYYLQQWGALAGLPTITAHEAGLRLGQALRLADLVHYECYLPDFVGHRRIVETPEHTLELIDTMLGAIISQMQP SDSLILVSDHGNLEMIEHTSHSRNPVPLLVVGAKAQAAAKVEDISQITPLILDLLI
Sequences:
>Translated_296_residues MSVIVCFIDGVGLLPHAAAPWTTAHLPTLTNLLGDLPHSNLQIEQPNLYFRAIDATLGVEGLPQSGTGHTSLWTGVNASA LLGRHYPAYPAPSQRPMIAEQSLFAKVQQLGRTSLIATVHRDRYWELVAKREQRATAAALAAQVVDLNLPATPEWLAGQA VTWDITGYYLQQWGALAGLPTITAHEAGLRLGQALRLADLVHYECYLPDFVGHRRIVETPEHTLELIDTMLGAIISQMQP SDSLILVSDHGNLEMIEHTSHSRNPVPLLVVGAKAQAAAKVEDISQITPLILDLLI >Mature_295_residues SVIVCFIDGVGLLPHAAAPWTTAHLPTLTNLLGDLPHSNLQIEQPNLYFRAIDATLGVEGLPQSGTGHTSLWTGVNASAL LGRHYPAYPAPSQRPMIAEQSLFAKVQQLGRTSLIATVHRDRYWELVAKREQRATAAALAAQVVDLNLPATPEWLAGQAV TWDITGYYLQQWGALAGLPTITAHEAGLRLGQALRLADLVHYECYLPDFVGHRRIVETPEHTLELIDTMLGAIISQMQPS DSLILVSDHGNLEMIEHTSHSRNPVPLLVVGAKAQAAAKVEDISQITPLILDLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32188; Mature: 32057
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIVCFIDGVGLLPHAAAPWTTAHLPTLTNLLGDLPHSNLQIEQPNLYFRAIDATLGVE CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEHHCCCC GLPQSGTGHTSLWTGVNASALLGRHYPAYPAPSQRPMIAEQSLFAKVQQLGRTSLIATVH CCCCCCCCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH RDRYWELVAKREQRATAAALAAQVVDLNLPATPEWLAGQAVTWDITGYYLQQWGALAGLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCC TITAHEAGLRLGQALRLADLVHYECYLPDFVGHRRIVETPEHTLELIDTMLGAIISQMQP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SDSLILVSDHGNLEMIEHTSHSRNPVPLLVVGAKAQAAAKVEDISQITPLILDLLI CCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SVIVCFIDGVGLLPHAAAPWTTAHLPTLTNLLGDLPHSNLQIEQPNLYFRAIDATLGVE EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEHHCCCC GLPQSGTGHTSLWTGVNASALLGRHYPAYPAPSQRPMIAEQSLFAKVQQLGRTSLIATVH CCCCCCCCCCHHCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH RDRYWELVAKREQRATAAALAAQVVDLNLPATPEWLAGQAVTWDITGYYLQQWGALAGLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECHHHHHHHHHHHCCCC TITAHEAGLRLGQALRLADLVHYECYLPDFVGHRRIVETPEHTLELIDTMLGAIISQMQP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SDSLILVSDHGNLEMIEHTSHSRNPVPLLVVGAKAQAAAKVEDISQITPLILDLLI CCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA