Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901052

Identifier: 159901052

GI number: 159901052

Start: 5811254

End: 5811802

Strand: Reverse

Name: 159901052

Synonym: Haur_4540

Alternate gene names: NA

Gene position: 5811802-5811254 (Counterclockwise)

Preceding gene: 159901053

Following gene: 159901051

Centisome position: 91.57

GC content: 48.82

Gene sequence:

>549_bases
ATGCAATGGTTAAACGAACCGCAACAATGGTCATTCAGCGATGATGTCCTGAGTATTACGGCTGAAACGAAAAGCGATTT
TTGGCGCACAACCCACTATGGTTTTATTTTTGATTCAGGCCATTTTTACTATCAAGTTGCCGAGAATAACTTTAACTGTA
GCGTGCGAGTTAAGGCCAACTATCAGAATCAATATGATCAAGCTGGGCTGATGGTGCGGCTCGATGAATATAATTGGCTC
AAATGTGGCATCGAATACGTCGATGGCATTTACCATGTGAGTGCCGTATTGACGCTGGAACACTCGGATTGGTCGGTGGT
AAAGTTGGCTGAAGCGCCGGAAGAACTTTGGCTAACAGTCACACGCAACGGCGATACGCTCCAAGTGCTCTATGCGACTG
AGGCTGATGCCACCCCAACGATGGTGCGTTTAGGCTACTTTCCGCCTGCTTTGCCGGTGCAAGTTGGCCCGATGGCTGCC
GCGCCAATCCAAAGTGGTTTTACTGCCGAATTTCGCGATTTTCGACTCGAAGCACTCGCGCAGGAATAG

Upstream 100 bases:

>100_bases
ATATTAGCCAGATCACGCCCTTGATTCTGGATCTATTAATCTAGCGCTATAATAGCGGTACTTGCTCAGATCCAGCTTAT
TTTTCGAAGGAGCAAACCCG

Downstream 100 bases:

>100_bases
CATGTCTGTGTCAGTATGGTATAGTTGGGCAAATTATCGACCAACAGGAAGCCTATGCTGACCCAAGCTCTACCACTGCT
CAATCCACCGCTCAAATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQWLNEPQQWSFSDDVLSITAETKSDFWRTTHYGFIFDSGHFYYQVAENNFNCSVRVKANYQNQYDQAGLMVRLDEYNWL
KCGIEYVDGIYHVSAVLTLEHSDWSVVKLAEAPEELWLTVTRNGDTLQVLYATEADATPTMVRLGYFPPALPVQVGPMAA
APIQSGFTAEFRDFRLEALAQE

Sequences:

>Translated_182_residues
MQWLNEPQQWSFSDDVLSITAETKSDFWRTTHYGFIFDSGHFYYQVAENNFNCSVRVKANYQNQYDQAGLMVRLDEYNWL
KCGIEYVDGIYHVSAVLTLEHSDWSVVKLAEAPEELWLTVTRNGDTLQVLYATEADATPTMVRLGYFPPALPVQVGPMAA
APIQSGFTAEFRDFRLEALAQE
>Mature_182_residues
MQWLNEPQQWSFSDDVLSITAETKSDFWRTTHYGFIFDSGHFYYQVAENNFNCSVRVKANYQNQYDQAGLMVRLDEYNWL
KCGIEYVDGIYHVSAVLTLEHSDWSVVKLAEAPEELWLTVTRNGDTLQVLYATEADATPTMVRLGYFPPALPVQVGPMAA
APIQSGFTAEFRDFRLEALAQE

Specific function: Unknown

COG id: COG3506

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322244, Length=176, Percent_Identity=39.2045454545455, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20837; Mature: 20837

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWLNEPQQWSFSDDVLSITAETKSDFWRTTHYGFIFDSGHFYYQVAENNFNCSVRVKAN
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEEC
YQNQYDQAGLMVRLDEYNWLKCGIEYVDGIYHVSAVLTLEHSDWSVVKLAEAPEELWLTV
CCCCCCCCCEEEEECCCCEEEECHHHHCHHEEEEEEEEEECCCCEEEEECCCCCEEEEEE
TRNGDTLQVLYATEADATPTMVRLGYFPPALPVQVGPMAAAPIQSGFTAEFRDFRLEALA
ECCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEC
QE
CC
>Mature Secondary Structure
MQWLNEPQQWSFSDDVLSITAETKSDFWRTTHYGFIFDSGHFYYQVAENNFNCSVRVKAN
CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEEC
YQNQYDQAGLMVRLDEYNWLKCGIEYVDGIYHVSAVLTLEHSDWSVVKLAEAPEELWLTV
CCCCCCCCCEEEEECCCCEEEECHHHHCHHEEEEEEEEEECCCCEEEEECCCCCEEEEEE
TRNGDTLQVLYATEADATPTMVRLGYFPPALPVQVGPMAAAPIQSGFTAEFRDFRLEALA
ECCCCEEEEEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEEC
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA