| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901040
Identifier: 159901040
GI number: 159901040
Start: 5794446
End: 5794823
Strand: Reverse
Name: 159901040
Synonym: Haur_4528
Alternate gene names: NA
Gene position: 5794823-5794446 (Counterclockwise)
Preceding gene: 159901041
Following gene: 159901039
Centisome position: 91.31
GC content: 46.83
Gene sequence:
>378_bases ATGCCTCAACAACAATCGATTGTTCGCTCAGTGCGCAGTAATCGCCATACAACCACGATCGATATCGGTGTGATCGGTCA AATTGTTCAGTCGGTCAGCGGTTCGATTGAAGGCATTTATGAAACCCAACTTGAAAGCGCCGAGCTTGTCGCTGAAGGTC GGGCTGAAAACGAACCAAAATCGAATGAGGAGCCGCAAACCCGTTTTGATGAGCGAGCGAGCATTGTCTTGCATCTCAAA TTAATTCCGTTTATCAATGAAGCGTTACCGCCAATCGTCAATGCGCTGCGCAAACGGGTGATCGAAAGCATTCAGCAATA TACCGAGTTGAATGTTCACGCTGTGCATATTCATATTGCTGGTTTGTGGTATCGCTAA
Upstream 100 bases:
>100_bases ATTGGCAGTACTTTGGAGCGGCTACGAATCGCTTTAGGGGCGACTGCGCCAACCGCTAGCCCACAACCAACCGCTACCCC AACTCGTTAAGGAGCCAACT
Downstream 100 bases:
>100_bases AAGAGCATAGAACATAGAACATAGAGCGTAAAACATAAAACATAGATGGAATGGTTTATGAGGTTGGCAACCGTCATTGT TCCCTCACCCCCTAGCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPQQQSIVRSVRSNRHTTTIDIGVIGQIVQSVSGSIEGIYETQLESAELVAEGRAENEPKSNEEPQTRFDERASIVLHLK LIPFINEALPPIVNALRKRVIESIQQYTELNVHAVHIHIAGLWYR
Sequences:
>Translated_125_residues MPQQQSIVRSVRSNRHTTTIDIGVIGQIVQSVSGSIEGIYETQLESAELVAEGRAENEPKSNEEPQTRFDERASIVLHLK LIPFINEALPPIVNALRKRVIESIQQYTELNVHAVHIHIAGLWYR >Mature_124_residues PQQQSIVRSVRSNRHTTTIDIGVIGQIVQSVSGSIEGIYETQLESAELVAEGRAENEPKSNEEPQTRFDERASIVLHLKL IPFINEALPPIVNALRKRVIESIQQYTELNVHAVHIHIAGLWYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14119; Mature: 13988
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQQSIVRSVRSNRHTTTIDIGVIGQIVQSVSGSIEGIYETQLESAELVAEGRAENEPK CCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC SNEEPQTRFDERASIVLHLKLIPFINEALPPIVNALRKRVIESIQQYTELNVHAVHIHIA CCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE GLWYR EEECC >Mature Secondary Structure PQQQSIVRSVRSNRHTTTIDIGVIGQIVQSVSGSIEGIYETQLESAELVAEGRAENEPK CCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC SNEEPQTRFDERASIVLHLKLIPFINEALPPIVNALRKRVIESIQQYTELNVHAVHIHIA CCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE GLWYR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA