| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901041
Identifier: 159901041
GI number: 159901041
Start: 5794834
End: 5795406
Strand: Reverse
Name: 159901041
Synonym: Haur_4529
Alternate gene names: NA
Gene position: 5795406-5794834 (Counterclockwise)
Preceding gene: 159901043
Following gene: 159901040
Centisome position: 91.32
GC content: 53.58
Gene sequence:
>573_bases ATGAGCGAACAAAGCGATGCTCCCAAGCCAATTGTGATTAAACAAAAACGGGGATGTTTGGCCACCCTGGTGGGTTCGGC CTTGACGATTATTGTGAGTGCAGGGCTTGGGGCGGCCTTGGCGCTCTTGGTGATGTGGTATGGCCCGCGCAATTTTGGGG TTAGCTTTCCCGATAGCACTGGGCGGATCGCTGCGCTTGAACAAGCCCAACAAACCGCAATCATCCAACAAACTGATCAG GCGGCGACCTTGCGGGGCTTAGCCGATTTGCGTGGCTCGGTCGATGGCTTGCGCGAGCGGGTGCAAACGATTGAGAGCAA ACTCAATACCCGCGAAACCGACCTTGATAGCTTGCAAAAACAAATCGACTCGAATCTTGATGCCTTATTGGCGATTCAAT CGCGACTGAATGAGCTTGAATCGATTCCTGCCAATGCGGCCTTGACCAATCGGCTTGATAGCGTTGAACAAGATTTAGCC AGCATTGGCAGTACTTTGGAGCGGCTACGAATCGCTTTAGGGGCGACTGCGCCAACCGCTAGCCCACAACCAACCGCTAC CCCAACTCGTTAA
Upstream 100 bases:
>100_bases AGCTATATTTTACATTTTGGGCAATATTGAGTATTGGCTAGATTCGAGTATTATTTAAGCCAAATGCAACCATCTGTTGA TGGTATGGAGAGCCAAATCG
Downstream 100 bases:
>100_bases GGAGCCAACTATGCCTCAACAACAATCGATTGTTCGCTCAGTGCGCAGTAATCGCCATACAACCACGATCGATATCGGTG TGATCGGTCAAATTGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQ AATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLA SIGSTLERLRIALGATAPTASPQPTATPTR
Sequences:
>Translated_190_residues MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQ AATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLA SIGSTLERLRIALGATAPTASPQPTATPTR >Mature_189_residues SEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQA ATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLAS IGSTLERLRIALGATAPTASPQPTATPTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20158; Mature: 20027
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDST CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GRIAALEQAQQTAIIQQTDQAATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLASIGSTLERLRIALGATAPTA HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPQPTATPTR CCCCCCCCCC >Mature Secondary Structure SEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDST CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GRIAALEQAQQTAIIQQTDQAATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLASIGSTLERLRIALGATAPTA HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPQPTATPTR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA