Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901041

Identifier: 159901041

GI number: 159901041

Start: 5794834

End: 5795406

Strand: Reverse

Name: 159901041

Synonym: Haur_4529

Alternate gene names: NA

Gene position: 5795406-5794834 (Counterclockwise)

Preceding gene: 159901043

Following gene: 159901040

Centisome position: 91.32

GC content: 53.58

Gene sequence:

>573_bases
ATGAGCGAACAAAGCGATGCTCCCAAGCCAATTGTGATTAAACAAAAACGGGGATGTTTGGCCACCCTGGTGGGTTCGGC
CTTGACGATTATTGTGAGTGCAGGGCTTGGGGCGGCCTTGGCGCTCTTGGTGATGTGGTATGGCCCGCGCAATTTTGGGG
TTAGCTTTCCCGATAGCACTGGGCGGATCGCTGCGCTTGAACAAGCCCAACAAACCGCAATCATCCAACAAACTGATCAG
GCGGCGACCTTGCGGGGCTTAGCCGATTTGCGTGGCTCGGTCGATGGCTTGCGCGAGCGGGTGCAAACGATTGAGAGCAA
ACTCAATACCCGCGAAACCGACCTTGATAGCTTGCAAAAACAAATCGACTCGAATCTTGATGCCTTATTGGCGATTCAAT
CGCGACTGAATGAGCTTGAATCGATTCCTGCCAATGCGGCCTTGACCAATCGGCTTGATAGCGTTGAACAAGATTTAGCC
AGCATTGGCAGTACTTTGGAGCGGCTACGAATCGCTTTAGGGGCGACTGCGCCAACCGCTAGCCCACAACCAACCGCTAC
CCCAACTCGTTAA

Upstream 100 bases:

>100_bases
AGCTATATTTTACATTTTGGGCAATATTGAGTATTGGCTAGATTCGAGTATTATTTAAGCCAAATGCAACCATCTGTTGA
TGGTATGGAGAGCCAAATCG

Downstream 100 bases:

>100_bases
GGAGCCAACTATGCCTCAACAACAATCGATTGTTCGCTCAGTGCGCAGTAATCGCCATACAACCACGATCGATATCGGTG
TGATCGGTCAAATTGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQ
AATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLA
SIGSTLERLRIALGATAPTASPQPTATPTR

Sequences:

>Translated_190_residues
MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQ
AATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLA
SIGSTLERLRIALGATAPTASPQPTATPTR
>Mature_189_residues
SEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDSTGRIAALEQAQQTAIIQQTDQA
ATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQKQIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLAS
IGSTLERLRIALGATAPTASPQPTATPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20158; Mature: 20027

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDST
CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRIAALEQAQQTAIIQQTDQAATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLASIGSTLERLRIALGATAPTA
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPQPTATPTR
CCCCCCCCCC
>Mature Secondary Structure 
SEQSDAPKPIVIKQKRGCLATLVGSALTIIVSAGLGAALALLVMWYGPRNFGVSFPDST
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GRIAALEQAQQTAIIQQTDQAATLRGLADLRGSVDGLRERVQTIESKLNTRETDLDSLQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QIDSNLDALLAIQSRLNELESIPANAALTNRLDSVEQDLASIGSTLERLRIALGATAPTA
HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SPQPTATPTR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA