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The map label for this gene is ybbA [H]

Identifier: 159901037

GI number: 159901037

Start: 5791318

End: 5792151

Strand: Reverse

Name: ybbA [H]

Synonym: Haur_4525

Alternate gene names: 159901037

Gene position: 5792151-5791318 (Counterclockwise)

Preceding gene: 159901038

Following gene: 159901036

Centisome position: 91.26

GC content: 49.16

Gene sequence:

>834_bases
ATGCAATCGATTGAATTATCCGATGCAACTGGATTTTTAGAACGCTACGCCGATATGCCGATTCGTGGCCTTTTACCACG
CAATGTCGATGTTTGGTTGCCTGCCAACTATCATAGTAGTAGCGAAGCTTTTCCGGTAATTTATATGCACGATGGCCAAA
ACTTGTTTGACCCAGCCTTGGCCTATATCGGAGTTGATTGGGGAATTGACGAGGCGCTCGAAAATCTGATTGCCAGCCAA
ACAATCAACGGGGCAATTGTGGTTGGCATTTGGAATAGCGAACAACGGATTCGCGATTATTTGCCAGCCAAGCCGTTTTA
TAGTGCTAGCGCCGCGATCCAAGCCCAATTTGAAACAGCTGTTGGTGGTGGCCCGCTTTCCGACGAATATCTAGCTTGGA
TCGTCAAAACGCTCAAGCCGCAGATTGATACACGCTATCGCACTCACCCTGAGCCTGAACATACCAGCATTATGGGCGCA
AGTATGGGTGGGCTGATTTCGCTGTATGCCTTGGTTGAATATCCCCAAATCTTTGGTAATGCTGGGTGTGTTTCAACTCA
CTGGCCGATTGGCGCTAGCTCGTTGGTGGCATGGCTGGGCAAACGTTTGCCTAAGGCTGGCAAGCATCGAATCTATTTCG
ATTTTGGCACTGAGGATCTTGACGCTGAGTACGAACCCTATCAAATTGAGATGGATGGGTTTATGCAGGCAGCGGGATAT
ATTCAAGGCGATAATTGGCTTACCCAGAAATTTGTGGGAGCGGGCCATTCTGAGCTGGCTTGGCGCGAACGAGCTGAATT
GCCACTGGCCTTTTTATTGGGAGCGAGCGTGTGA

Upstream 100 bases:

>100_bases
TTCATCAGCGAACTTGGCCGCGCTCAAGCCTGCCACCCAAAATAGCGATTAATTTCGTCCAAACAATGCTGAAAACCTTA
GATTCGTAGTTGAGGTAGCT

Downstream 100 bases:

>100_bases
GAATTTTAATTATTGCCTTTGGCACACGCGGCGATGTTCAGCCGATGGTGGCCTTGGGCTTGGCCTTGCAAGAGCGTGGG
CATTCGATAACCCTGTTGGT

Product: putative esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQSIELSDATGFLERYADMPIRGLLPRNVDVWLPANYHSSSEAFPVIYMHDGQNLFDPALAYIGVDWGIDEALENLIASQ
TINGAIVVGIWNSEQRIRDYLPAKPFYSASAAIQAQFETAVGGGPLSDEYLAWIVKTLKPQIDTRYRTHPEPEHTSIMGA
SMGGLISLYALVEYPQIFGNAGCVSTHWPIGASSLVAWLGKRLPKAGKHRIYFDFGTEDLDAEYEPYQIEMDGFMQAAGY
IQGDNWLTQKFVGAGHSELAWRERAELPLAFLLGASV

Sequences:

>Translated_277_residues
MQSIELSDATGFLERYADMPIRGLLPRNVDVWLPANYHSSSEAFPVIYMHDGQNLFDPALAYIGVDWGIDEALENLIASQ
TINGAIVVGIWNSEQRIRDYLPAKPFYSASAAIQAQFETAVGGGPLSDEYLAWIVKTLKPQIDTRYRTHPEPEHTSIMGA
SMGGLISLYALVEYPQIFGNAGCVSTHWPIGASSLVAWLGKRLPKAGKHRIYFDFGTEDLDAEYEPYQIEMDGFMQAAGY
IQGDNWLTQKFVGAGHSELAWRERAELPLAFLLGASV
>Mature_277_residues
MQSIELSDATGFLERYADMPIRGLLPRNVDVWLPANYHSSSEAFPVIYMHDGQNLFDPALAYIGVDWGIDEALENLIASQ
TINGAIVVGIWNSEQRIRDYLPAKPFYSASAAIQAQFETAVGGGPLSDEYLAWIVKTLKPQIDTRYRTHPEPEHTSIMGA
SMGGLISLYALVEYPQIFGNAGCVSTHWPIGASSLVAWLGKRLPKAGKHRIYFDFGTEDLDAEYEPYQIEMDGFMQAAGY
IQGDNWLTQKFVGAGHSELAWRERAELPLAFLLGASV

Specific function: Unknown

COG id: COG2819

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30694; Mature: 30694

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIELSDATGFLERYADMPIRGLLPRNVDVWLPANYHSSSEAFPVIYMHDGQNLFDPAL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHH
AYIGVDWGIDEALENLIASQTINGAIVVGIWNSEQRIRDYLPAKPFYSASAAIQAQFETA
HHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCCHHEEEEEHHH
VGGGPLSDEYLAWIVKTLKPQIDTRYRTHPEPEHTSIMGASMGGLISLYALVEYPQIFGN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHCCHHHHHHHHHHHHHHHHHCC
AGCVSTHWPIGASSLVAWLGKRLPKAGKHRIYFDFGTEDLDAEYEPYQIEMDGFMQAAGY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHCCE
IQGDNWLTQKFVGAGHSELAWRERAELPLAFLLGASV
EECCCHHHHHHHCCCCHHHHHHHHHCCCEEHCCCCCC
>Mature Secondary Structure
MQSIELSDATGFLERYADMPIRGLLPRNVDVWLPANYHSSSEAFPVIYMHDGQNLFDPAL
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHH
AYIGVDWGIDEALENLIASQTINGAIVVGIWNSEQRIRDYLPAKPFYSASAAIQAQFETA
HHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCCHHEEEEEHHH
VGGGPLSDEYLAWIVKTLKPQIDTRYRTHPEPEHTSIMGASMGGLISLYALVEYPQIFGN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHCCHHHHHHHHHHHHHHHHHCC
AGCVSTHWPIGASSLVAWLGKRLPKAGKHRIYFDFGTEDLDAEYEPYQIEMDGFMQAAGY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHHHHHCCE
IQGDNWLTQKFVGAGHSELAWRERAELPLAFLLGASV
EECCCHHHHHHHCCCCHHHHHHHHHCCCEEHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]