| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901036
Identifier: 159901036
GI number: 159901036
Start: 5790056
End: 5791321
Strand: Reverse
Name: 159901036
Synonym: Haur_4524
Alternate gene names: NA
Gene position: 5791321-5790056 (Counterclockwise)
Preceding gene: 159901037
Following gene: 159901035
Centisome position: 91.25
GC content: 52.92
Gene sequence:
>1266_bases GTGAGAATTTTAATTATTGCCTTTGGCACACGCGGCGATGTTCAGCCGATGGTGGCCTTGGGCTTGGCCTTGCAAGAGCG TGGGCATTCGATAACCCTGTTGGTCAGCAGCAATTTTAAAAGCTGGGTTGAGGAGTTTGGGTTACAAGTGGCGACTGCGC GGGTCGATATTCAGCAGATGATGTTGAGCGATCATGGCAACGATTGGGTCAAACATGGGGCTAATCCAATTAAACAGCGC AATGCGATGCGCCGTTTGTTGAAGCAACATGCCTTGACCATGGTTGAAGATGCTTGGCAAGTCGCCCAAAACTGCGATGT TTTGATCAGCAGTTTTACCTCGGATGTCTTTGCAGTGACGTTGGCTGAAGTGCTGAATGTGGTGCATATTAGCACGCCAC TGCAACCAGCCATGTTGGCCACCCGTTGCGGCCCTGCTAGTGCGGCGGCAATTCTACCAAACCACGAGAGCATCATTAAT TATTGGTTTGGGCGCTGGGTGCTTGAGCCATTTATGTGGCAAGTTGGCGGCGATTTTATTAATCAGTTTCGCCAGCAACA GCTCAAATTGCCAGCCCAAAGTGTGCGCGAATATGCTCAACGCTTGCGTCAAACCACGATTATTCAAGGCTATAGCCCGG CAATCATTCCGCATCCCAGCGATTGGCCCGCCAATATTCAGACGGTTGGTTATTGGATGTTGCCGCCCGATGAGGCTTGG CAAATGCCGCCTGAGCTTGAGCAATTTTTGGCCGATGGCCCAACTCCAATCTATATAGGCTTTGGTAGCATGACCGGAGC TAACCCTGATGCTTTTACCGAATTGTTGCTCAAGGCGGTGGCACATAGCGGCCAGCGGGCAATTATCCAAACTGGTTGGG CTGGCTTGGGCCAAATCGAATTGCCCAAAACTGTTTTTCGGATTGGCTCAGCGCCGCATGAACGGCTTTTTCGCCATGTC AAAGCGGCGGTACACCATGGCGGGGCTGGCACAACGGCTGCAAGCTTAGCGGCTGGTTTGCCAACCGTCATCGTGCCGCA CTTGGGCGATCAACTGCGTTGGGGTCAGCGCGTGTTTGATTTGGGCTTAGGGCCAAAGGCGATTCCGCGCAACAAACTTA CGGTTGATCGGTTGGCTTGGGCGATTTCGCAGGCCGCTAACACGCCGAGCATGCAACACAATGCCCAAGCCATGGCCAAA ACCCTGCAAGCTGAGCAGGGCATCAGCCGCGCGGTCGAAATTATTGAACAACGGATACAAGCCTAG
Upstream 100 bases:
>100_bases ATAATTGGCTTACCCAGAAATTTGTGGGAGCGGGCCATTCTGAGCTGGCTTGGCGCGAACGAGCTGAATTGCCACTGGCC TTTTTATTGGGAGCGAGCGT
Downstream 100 bases:
>100_bases TTTTGGAATGGTAGTGAGGCGCTCGCAATGCGCTATTTTTCGCAACAAAAGCTTGATCAACTACTGGCTGCGCACGCCGA ATGGTTACAAGAACCTGTTG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MRILIIAFGTRGDVQPMVALGLALQERGHSITLLVSSNFKSWVEEFGLQVATARVDIQQMMLSDHGNDWVKHGANPIKQR NAMRRLLKQHALTMVEDAWQVAQNCDVLISSFTSDVFAVTLAEVLNVVHISTPLQPAMLATRCGPASAAAILPNHESIIN YWFGRWVLEPFMWQVGGDFINQFRQQQLKLPAQSVREYAQRLRQTTIIQGYSPAIIPHPSDWPANIQTVGYWMLPPDEAW QMPPELEQFLADGPTPIYIGFGSMTGANPDAFTELLLKAVAHSGQRAIIQTGWAGLGQIELPKTVFRIGSAPHERLFRHV KAAVHHGGAGTTAASLAAGLPTVIVPHLGDQLRWGQRVFDLGLGPKAIPRNKLTVDRLAWAISQAANTPSMQHNAQAMAK TLQAEQGISRAVEIIEQRIQA
Sequences:
>Translated_421_residues MRILIIAFGTRGDVQPMVALGLALQERGHSITLLVSSNFKSWVEEFGLQVATARVDIQQMMLSDHGNDWVKHGANPIKQR NAMRRLLKQHALTMVEDAWQVAQNCDVLISSFTSDVFAVTLAEVLNVVHISTPLQPAMLATRCGPASAAAILPNHESIIN YWFGRWVLEPFMWQVGGDFINQFRQQQLKLPAQSVREYAQRLRQTTIIQGYSPAIIPHPSDWPANIQTVGYWMLPPDEAW QMPPELEQFLADGPTPIYIGFGSMTGANPDAFTELLLKAVAHSGQRAIIQTGWAGLGQIELPKTVFRIGSAPHERLFRHV KAAVHHGGAGTTAASLAAGLPTVIVPHLGDQLRWGQRVFDLGLGPKAIPRNKLTVDRLAWAISQAANTPSMQHNAQAMAK TLQAEQGISRAVEIIEQRIQA >Mature_421_residues MRILIIAFGTRGDVQPMVALGLALQERGHSITLLVSSNFKSWVEEFGLQVATARVDIQQMMLSDHGNDWVKHGANPIKQR NAMRRLLKQHALTMVEDAWQVAQNCDVLISSFTSDVFAVTLAEVLNVVHISTPLQPAMLATRCGPASAAAILPNHESIIN YWFGRWVLEPFMWQVGGDFINQFRQQQLKLPAQSVREYAQRLRQTTIIQGYSPAIIPHPSDWPANIQTVGYWMLPPDEAW QMPPELEQFLADGPTPIYIGFGSMTGANPDAFTELLLKAVAHSGQRAIIQTGWAGLGQIELPKTVFRIGSAPHERLFRHV KAAVHHGGAGTTAASLAAGLPTVIVPHLGDQLRWGQRVFDLGLGPKAIPRNKLTVDRLAWAISQAANTPSMQHNAQAMAK TLQAEQGISRAVEIIEQRIQA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=434, Percent_Identity=30.4147465437788, Blast_Score=194, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 - InterPro: IPR002213 [H]
Pfam domain/function: PF03033 Glyco_transf_28; PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 46399; Mature: 46399
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIIAFGTRGDVQPMVALGLALQERGHSITLLVSSNFKSWVEEFGLQVATARVDIQQM CEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHH MLSDHGNDWVKHGANPIKQRNAMRRLLKQHALTMVEDAWQVAQNCDVLISSFTSDVFAVT HHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEVLNVVHISTPLQPAMLATRCGPASAAAILPNHESIINYWFGRWVLEPFMWQVGGDFI HHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHH NQFRQQQLKLPAQSVREYAQRLRQTTIIQGYSPAIIPHPSDWPANIQTVGYWMLPPDEAW HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH QMPPELEQFLADGPTPIYIGFGSMTGANPDAFTELLLKAVAHSGQRAIIQTGWAGLGQIE CCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC LPKTVFRIGSAPHERLFRHVKAAVHHGGAGTTAASLAAGLPTVIVPHLGDQLRWGQRVFD CCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHH LGLGPKAIPRNKLTVDRLAWAISQAANTPSMQHNAQAMAKTLQAEQGISRAVEIIEQRIQ CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure MRILIIAFGTRGDVQPMVALGLALQERGHSITLLVSSNFKSWVEEFGLQVATARVDIQQM CEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHH MLSDHGNDWVKHGANPIKQRNAMRRLLKQHALTMVEDAWQVAQNCDVLISSFTSDVFAVT HHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEVLNVVHISTPLQPAMLATRCGPASAAAILPNHESIINYWFGRWVLEPFMWQVGGDFI HHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHH NQFRQQQLKLPAQSVREYAQRLRQTTIIQGYSPAIIPHPSDWPANIQTVGYWMLPPDEAW HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH QMPPELEQFLADGPTPIYIGFGSMTGANPDAFTELLLKAVAHSGQRAIIQTGWAGLGQIE CCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC LPKTVFRIGSAPHERLFRHVKAAVHHGGAGTTAASLAAGLPTVIVPHLGDQLRWGQRVFD CCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHH LGLGPKAIPRNKLTVDRLAWAISQAANTPSMQHNAQAMAKTLQAEQGISRAVEIIEQRIQ CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]