| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901032
Identifier: 159901032
GI number: 159901032
Start: 5786045
End: 5787319
Strand: Reverse
Name: 159901032
Synonym: Haur_4519
Alternate gene names: NA
Gene position: 5787319-5786045 (Counterclockwise)
Preceding gene: 159901033
Following gene: 159901031
Centisome position: 91.19
GC content: 51.37
Gene sequence:
>1275_bases ATGGGAGCTGAAATCGTTCAAGCTCAGTATGACCAACTCACTCAAGTTGCAAGTCGGTTTGGCAAGCAATCGGAGGTAGT TGATCAAATCAACAGCCAAGTTCGCCAGAGCTATGAAACATTAGCCAATGGCGGATGGATGGGTGATGCGGCAAAGGCAT TTTTCAATGAAATGCAGACGGAAATTTTCCCCACAATGCAACGTCTAACAGGTGTATTGCGGGAAGCTCAAACGGTAACC CAACAAATTAGTACGATCTTCCAGCAAGCTGAACAAGAGGCAGCTAAGGGGATCACATTTGCTGATGGTGGAGCTAGCTC AAGTGCTGGCAGTGGTGTTTCGTTCAGCGCAGCAGCAGGTAATGCGGCAGGCTCGGCGGCAGCGAACCAGTTGCCACCAC CACGCATGTACATTGTCAACGGGATTAACGCCAGCGAGCCAGATGGTACTCCAGGTGAAGGGCCACAGCAACTGGCCGGC TTGTTGGCTGCCCACGGCTATGATCCTAGCCAAATCAAGGCGATGCCGGCAATTTACAACACCAACTACACCACCAACTT GCAAGGCACCGATTTGCAAGGTACCAATCATGGTGGTTGGTTATCGCCCGTCGATTGGCTGACCGGAGCCGGAGCCTCGA TCGTGAATGGAGTTACGGGTGCCGGTGCCAGTGTTGTCAATGGGGCTTCGGCGTTGTTTAATACTGGAGTCGGGGTCAGC GAAGTTGTGCAAGAGTATACAATGCAAGATCAAGGCAAGTATACCCAGGAAAGCTACAACTTTATTCAACAAGACCTTGC CCGTAACCCATTATTGCCCGGCCAAACCGTCATGCTAATTGGGCATAGCGGCGGTGGGGCAGTTGTCAGTAACCTCGCGC CAATGCTTGAAAATAACATGGGCGTTGATGTTTCTGGGGTGGTTACGCTCGGGTCGCCGGTAGCCAATGCTGATCGGGCG ATGCAATATGCCAAATTCCTCAGCGTTAGCGACAAAGGCGATTATATTGGCCAACCATGGATTCGCTCCGATGAAGGGCG TAATTTCCTAACTCCAGGCTTGATGACTGGCATTTTAGCGCCGAAATCCTTGCCATTGGTTGTGCCAGGGGTGCTTGGAG CCGATAACGCCGCCCGCGATGCTGGGATCAATTACTTTACGACCAATGCCAATGCGGGCAACCCAATTAGCAATCACAAC TCCTATTGGACGAGCAACGATGTGGTTAGCATCATTAAAAACAGCTATCCCCAAGTTGCTCCATACCTGAAGTAA
Upstream 100 bases:
>100_bases TATACGATGATACTGCTACATTTCGGTTTTTTACCCCACATTCGGTCAACGAGAGCAAGGGCATTCCCGAGGTTGAAGCG CACTTTTAAGGAGTATTGGC
Downstream 100 bases:
>100_bases TCCATGCAGGTTGTGTGTAGAGTATGGTGGGGGATGCTTGCAATGGGCTTGTTGGCATCACTCTTTGGATGTGGATCAAG TGCTGTTCCCGAGGCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MGAEIVQAQYDQLTQVASRFGKQSEVVDQINSQVRQSYETLANGGWMGDAAKAFFNEMQTEIFPTMQRLTGVLREAQTVT QQISTIFQQAEQEAAKGITFADGGASSSAGSGVSFSAAAGNAAGSAAANQLPPPRMYIVNGINASEPDGTPGEGPQQLAG LLAAHGYDPSQIKAMPAIYNTNYTTNLQGTDLQGTNHGGWLSPVDWLTGAGASIVNGVTGAGASVVNGASALFNTGVGVS EVVQEYTMQDQGKYTQESYNFIQQDLARNPLLPGQTVMLIGHSGGGAVVSNLAPMLENNMGVDVSGVVTLGSPVANADRA MQYAKFLSVSDKGDYIGQPWIRSDEGRNFLTPGLMTGILAPKSLPLVVPGVLGADNAARDAGINYFTTNANAGNPISNHN SYWTSNDVVSIIKNSYPQVAPYLK
Sequences:
>Translated_424_residues MGAEIVQAQYDQLTQVASRFGKQSEVVDQINSQVRQSYETLANGGWMGDAAKAFFNEMQTEIFPTMQRLTGVLREAQTVT QQISTIFQQAEQEAAKGITFADGGASSSAGSGVSFSAAAGNAAGSAAANQLPPPRMYIVNGINASEPDGTPGEGPQQLAG LLAAHGYDPSQIKAMPAIYNTNYTTNLQGTDLQGTNHGGWLSPVDWLTGAGASIVNGVTGAGASVVNGASALFNTGVGVS EVVQEYTMQDQGKYTQESYNFIQQDLARNPLLPGQTVMLIGHSGGGAVVSNLAPMLENNMGVDVSGVVTLGSPVANADRA MQYAKFLSVSDKGDYIGQPWIRSDEGRNFLTPGLMTGILAPKSLPLVVPGVLGADNAARDAGINYFTTNANAGNPISNHN SYWTSNDVVSIIKNSYPQVAPYLK >Mature_423_residues GAEIVQAQYDQLTQVASRFGKQSEVVDQINSQVRQSYETLANGGWMGDAAKAFFNEMQTEIFPTMQRLTGVLREAQTVTQ QISTIFQQAEQEAAKGITFADGGASSSAGSGVSFSAAAGNAAGSAAANQLPPPRMYIVNGINASEPDGTPGEGPQQLAGL LAAHGYDPSQIKAMPAIYNTNYTTNLQGTDLQGTNHGGWLSPVDWLTGAGASIVNGVTGAGASVVNGASALFNTGVGVSE VVQEYTMQDQGKYTQESYNFIQQDLARNPLLPGQTVMLIGHSGGGAVVSNLAPMLENNMGVDVSGVVTLGSPVANADRAM QYAKFLSVSDKGDYIGQPWIRSDEGRNFLTPGLMTGILAPKSLPLVVPGVLGADNAARDAGINYFTTNANAGNPISNHNS YWTSNDVVSIIKNSYPQVAPYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44383; Mature: 44252
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAEIVQAQYDQLTQVASRFGKQSEVVDQINSQVRQSYETLANGGWMGDAAKAFFNEMQT CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EIFPTMQRLTGVLREAQTVTQQISTIFQQAEQEAAKGITFADGGASSSAGSGVSFSAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEECCCC NAAGSAAANQLPPPRMYIVNGINASEPDGTPGEGPQQLAGLLAAHGYDPSQIKAMPAIYN CCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHEECCCEEC TNYTTNLQGTDLQGTNHGGWLSPVDWLTGAGASIVNGVTGAGASVVNGASALFNTGVGVS CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHH EVVQEYTMQDQGKYTQESYNFIQQDLARNPLLPGQTVMLIGHSGGGAVVSNLAPMLENNM HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC GVDVSGVVTLGSPVANADRAMQYAKFLSVSDKGDYIGQPWIRSDEGRNFLTPGLMTGILA CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC PKSLPLVVPGVLGADNAARDAGINYFTTNANAGNPISNHNSYWTSNDVVSIIKNSYPQVA CCCCCEEECCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC PYLK CCCC >Mature Secondary Structure GAEIVQAQYDQLTQVASRFGKQSEVVDQINSQVRQSYETLANGGWMGDAAKAFFNEMQT CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EIFPTMQRLTGVLREAQTVTQQISTIFQQAEQEAAKGITFADGGASSSAGSGVSFSAAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEECCCC NAAGSAAANQLPPPRMYIVNGINASEPDGTPGEGPQQLAGLLAAHGYDPSQIKAMPAIYN CCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHEECCCEEC TNYTTNLQGTDLQGTNHGGWLSPVDWLTGAGASIVNGVTGAGASVVNGASALFNTGVGVS CCEECCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHH EVVQEYTMQDQGKYTQESYNFIQQDLARNPLLPGQTVMLIGHSGGGAVVSNLAPMLENNM HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCC GVDVSGVVTLGSPVANADRAMQYAKFLSVSDKGDYIGQPWIRSDEGRNFLTPGLMTGILA CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC PKSLPLVVPGVLGADNAARDAGINYFTTNANAGNPISNHNSYWTSNDVVSIIKNSYPQVA CCCCCEEECCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC PYLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA