| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901031
Identifier: 159901031
GI number: 159901031
Start: 5785397
End: 5786002
Strand: Reverse
Name: 159901031
Synonym: Haur_4518
Alternate gene names: NA
Gene position: 5786002-5785397 (Counterclockwise)
Preceding gene: 159901032
Following gene: 159901030
Centisome position: 91.17
GC content: 50.33
Gene sequence:
>606_bases ATGGGCTTGTTGGCATCACTCTTTGGATGTGGATCAAGTGCTGTTCCCGAGGCCGTGCGTAACGGCCTCGACGAACAGTC GATTCAAACAATTGGCACACTCGATATCAGCCCGTGGTTGGGTGACAAACCACGCTATCGCCGTTTAAGCTTGATTCGAG CGCAAACTGTGGCTGGCGAACCAACCACGATTGCCTACCTTGAGCCAAATGCTGATGCAGCGGCGTTTGCGCTCCCTTTG ACGCAAACCTTTCCCGAAGCCCCGCTGCAAACAGCCTTATTCGAGATCGATGGCTATCGGCTAATTGTTGGCTTGGTTGA TGATCGTGTTATGGGTGAACTCACAACGATCGAATTTGAACGTGAAGAACCAGATCAAACTCGTTGGTTAGAAGCATTAA AAGTTAGTAAACTTAATAAACGGACATTTGTGATTCCAATCGCCCCGAATGAACAAGCGCAATGGCCAACGGTCCAACGG ATTGCGGTGAACACTCGTGAATCGCGCCAACGTGGGGTCGATGATCGCAATGCTTCGGGCCACGAATGGGAACATCGATA TTCCAACCCGATTGCAATTGACAGTACCTTTGCGGTTGTACCGTAG
Upstream 100 bases:
>100_bases CGATGTGGTTAGCATCATTAAAAACAGCTATCCCCAAGTTGCTCCATACCTGAAGTAATCCATGCAGGTTGTGTGTAGAG TATGGTGGGGGATGCTTGCA
Downstream 100 bases:
>100_bases GAGATTAGGGCATGACAACCCCCCAACCCTTGGTCGCAGTAACACTTTCACGCAGTGAATTGCTGTTAATTAGTGCACTC TTGAAAGCTCCCGCTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGLLASLFGCGSSAVPEAVRNGLDEQSIQTIGTLDISPWLGDKPRYRRLSLIRAQTVAGEPTTIAYLEPNADAAAFALPL TQTFPEAPLQTALFEIDGYRLIVGLVDDRVMGELTTIEFEREEPDQTRWLEALKVSKLNKRTFVIPIAPNEQAQWPTVQR IAVNTRESRQRGVDDRNASGHEWEHRYSNPIAIDSTFAVVP
Sequences:
>Translated_201_residues MGLLASLFGCGSSAVPEAVRNGLDEQSIQTIGTLDISPWLGDKPRYRRLSLIRAQTVAGEPTTIAYLEPNADAAAFALPL TQTFPEAPLQTALFEIDGYRLIVGLVDDRVMGELTTIEFEREEPDQTRWLEALKVSKLNKRTFVIPIAPNEQAQWPTVQR IAVNTRESRQRGVDDRNASGHEWEHRYSNPIAIDSTFAVVP >Mature_200_residues GLLASLFGCGSSAVPEAVRNGLDEQSIQTIGTLDISPWLGDKPRYRRLSLIRAQTVAGEPTTIAYLEPNADAAAFALPLT QTFPEAPLQTALFEIDGYRLIVGLVDDRVMGELTTIEFEREEPDQTRWLEALKVSKLNKRTFVIPIAPNEQAQWPTVQRI AVNTRESRQRGVDDRNASGHEWEHRYSNPIAIDSTFAVVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22359; Mature: 22228
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLASLFGCGSSAVPEAVRNGLDEQSIQTIGTLDISPWLGDKPRYRRLSLIRAQTVAGE CCHHHHHHCCCCCCHHHHHHCCCCHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC PTTIAYLEPNADAAAFALPLTQTFPEAPLQTALFEIDGYRLIVGLVDDRVMGELTTIEFE CCEEEEECCCCCCEEEEECCHHCCCCCCHHHHHEEECCEEEEEEECCCHHHCCEEEEEEC REEPDQTRWLEALKVSKLNKRTFVIPIAPNEQAQWPTVQRIAVNTRESRQRGVDDRNASG CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCC HEWEHRYSNPIAIDSTFAVVP CCCHHHCCCCEEECCEEEECC >Mature Secondary Structure GLLASLFGCGSSAVPEAVRNGLDEQSIQTIGTLDISPWLGDKPRYRRLSLIRAQTVAGE CHHHHHHCCCCCCHHHHHHCCCCHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC PTTIAYLEPNADAAAFALPLTQTFPEAPLQTALFEIDGYRLIVGLVDDRVMGELTTIEFE CCEEEEECCCCCCEEEEECCHHCCCCCCHHHHHEEECCEEEEEEECCCHHHCCEEEEEEC REEPDQTRWLEALKVSKLNKRTFVIPIAPNEQAQWPTVQRIAVNTRESRQRGVDDRNASG CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCC HEWEHRYSNPIAIDSTFAVVP CCCHHHCCCCEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA