| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901030
Identifier: 159901030
GI number: 159901030
Start: 5784600
End: 5785385
Strand: Reverse
Name: 159901030
Synonym: Haur_4517
Alternate gene names: NA
Gene position: 5785385-5784600 (Counterclockwise)
Preceding gene: 159901031
Following gene: 159901029
Centisome position: 91.16
GC content: 48.85
Gene sequence:
>786_bases ATGACAACCCCCCAACCCTTGGTCGCAGTAACACTTTCACGCAGTGAATTGCTGTTAATTAGTGCACTCTTGAAAGCTCC CGCTTTGATGGGTGTTCAAGCGACCACCGCCGATGAGAATCAACGCGCTTTGGAGTTGTTGCAGGCTGAACATTCGCTCC GTGCTCGCAACGCTGCGGCGGTAGATGAAAATGGTCAATTATTAATTGTTCGAGATTTACTTGGAGTTGTGGCAAGTTGC GCGTATCCACAACGCTCACTGGTGGTTTATCATACTCGTGCCGATGGGGTGGTGCTGCAAGGGTTTGGCCATGTGCGCGA TGATTCTTTAGTTGTGCATACGGTGATTAACCCGGAAGTTCACAACCTCGCGCAGATGCCCAATCTTGATCGATTGATTG AAACGGTGTTTCAACTGAGCGATTACGCTGCGAACACGCCAGCGGTTAATTTGCATGTTGATATTAGCCGCGAAAAATTA GTGATGGCACGCCAATTGGCTGAGCAAGGCCAAACAGCGCAATCAGCCGATACCTTGGTGCGCAGCGGTGTTTCGCCGAC TGAAGCCGAATTGTTGGTGCGCATGTTCCGCTTGCCTTCAACTACTACCGTATTTGTAACCATCCAATATAGTGGCAGCC ATGCCATGGCCCGTGAATATACCCTATTTAAAAATGAAATTGGCTCGTTTTTGATGACCCAAGCCGACCTTGAAATTGAG CGCTATCAACTCAAGGGCATCGATTATATGGGGCTTGGCGGCATAATCTATGAGTCGCTTTCATAA
Upstream 100 bases:
>100_bases TCGATGATCGCAATGCTTCGGGCCACGAATGGGAACATCGATATTCCAACCCGATTGCAATTGACAGTACCTTTGCGGTT GTACCGTAGGAGATTAGGGC
Downstream 100 bases:
>100_bases GTTGGTTCGCCTGTACCAAACCGCTCTTTCGCTCGAATGGGCGGTTTTGGCGTTAATTGTGATGATCTAGCGCCGCACGG TGTCGGTTTGCATCCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTTPQPLVAVTLSRSELLLISALLKAPALMGVQATTADENQRALELLQAEHSLRARNAAAVDENGQLLIVRDLLGVVASC AYPQRSLVVYHTRADGVVLQGFGHVRDDSLVVHTVINPEVHNLAQMPNLDRLIETVFQLSDYAANTPAVNLHVDISREKL VMARQLAEQGQTAQSADTLVRSGVSPTEAELLVRMFRLPSTTTVFVTIQYSGSHAMAREYTLFKNEIGSFLMTQADLEIE RYQLKGIDYMGLGGIIYESLS
Sequences:
>Translated_261_residues MTTPQPLVAVTLSRSELLLISALLKAPALMGVQATTADENQRALELLQAEHSLRARNAAAVDENGQLLIVRDLLGVVASC AYPQRSLVVYHTRADGVVLQGFGHVRDDSLVVHTVINPEVHNLAQMPNLDRLIETVFQLSDYAANTPAVNLHVDISREKL VMARQLAEQGQTAQSADTLVRSGVSPTEAELLVRMFRLPSTTTVFVTIQYSGSHAMAREYTLFKNEIGSFLMTQADLEIE RYQLKGIDYMGLGGIIYESLS >Mature_260_residues TTPQPLVAVTLSRSELLLISALLKAPALMGVQATTADENQRALELLQAEHSLRARNAAAVDENGQLLIVRDLLGVVASCA YPQRSLVVYHTRADGVVLQGFGHVRDDSLVVHTVINPEVHNLAQMPNLDRLIETVFQLSDYAANTPAVNLHVDISREKLV MARQLAEQGQTAQSADTLVRSGVSPTEAELLVRMFRLPSTTTVFVTIQYSGSHAMAREYTLFKNEIGSFLMTQADLEIER YQLKGIDYMGLGGIIYESLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28631; Mature: 28500
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQPLVAVTLSRSELLLISALLKAPALMGVQATTADENQRALELLQAEHSLRARNAAA CCCCCCEEEEEECCCHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCE VDENGQLLIVRDLLGVVASCAYPQRSLVVYHTRADGVVLQGFGHVRDDSLVVHTVINPEV ECCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCH HNLAQMPNLDRLIETVFQLSDYAANTPAVNLHVDISREKLVMARQLAEQGQTAQSADTLV HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHH RSGVSPTEAELLVRMFRLPSTTTVFVTIQYSGSHAMAREYTLFKNEIGSFLMTQADLEIE HCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE RYQLKGIDYMGLGGIIYESLS EEEECCCCEECCCHHHHCCCC >Mature Secondary Structure TTPQPLVAVTLSRSELLLISALLKAPALMGVQATTADENQRALELLQAEHSLRARNAAA CCCCCEEEEEECCCHHHHHHHHHHCCHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCCE VDENGQLLIVRDLLGVVASCAYPQRSLVVYHTRADGVVLQGFGHVRDDSLVVHTVINPEV ECCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCH HNLAQMPNLDRLIETVFQLSDYAANTPAVNLHVDISREKLVMARQLAEQGQTAQSADTLV HHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHH RSGVSPTEAELLVRMFRLPSTTTVFVTIQYSGSHAMAREYTLFKNEIGSFLMTQADLEIE HCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEE RYQLKGIDYMGLGGIIYESLS EEEECCCCEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA