| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901011
Identifier: 159901011
GI number: 159901011
Start: 5758779
End: 5759363
Strand: Reverse
Name: 159901011
Synonym: Haur_4498
Alternate gene names: NA
Gene position: 5759363-5758779 (Counterclockwise)
Preceding gene: 159901016
Following gene: 159901010
Centisome position: 90.75
GC content: 44.79
Gene sequence:
>585_bases ATGACACCGACAATCATCAACGTTGGCTACGACGAAACCAATTATTACCTAATTGGGGCTACTGAAGGTTTTTTAATGCT CGATGTTGGTTGGCCTGGTAGTTTGGCTAAATTAATGGCCCAACTAAACCGTCAAGCTATCGCTTTTACGACAATTCGCT ACCTACTTGTTACCCATTATCATCCCGATCATGCTGGCCTCGTCCAAGAACTAAAAGCCCAAGGCGTGCAATTAGTGGTC ATCGAACAACAACGTTTCGCCATTCCCATCTTAAAAACCTACATCAAACCTCAATACCACTACCAAGAAATTACCTTCGA TCAAACAATTGTGCTGCGGATTGAAGATACGCGGCAGTGGCTCGCGTCAATTGGCATTGCTGGCGAAATTATTCTAACAC CTGGTCATTCTGATGATAGTGTTAGTTTGATTTTGGATAATGGGATCGCTTTCATTGGCGATTTACACCCTTACGCGAAT AGCGACGAAAATCCAGCCTTGATCGAACAAAGTTGGCAAGAACTGCAAAAACGCGGCGTAACCTTGTTGTATCCCGGCCA TGGCGGCACTCGTCCGTTGTTCTAA
Upstream 100 bases:
>100_bases ACCGTTGTACTCAGACCCAAGGCTGTATTACAGCTAAATAAGATAGGTTACTATAAGGCCGCGAGTGTGGTGAGTAACCT TTTAGAGAGGACATTCTACT
Downstream 100 bases:
>100_bases ACCCAAGCCTTATCCCAAGGGCTGAAGCAAAATAAGCCTTATGGTGGAGCCAATCAGCCAACTAATTCGGTTAATCTACC CTCAATTCATTGTGATGGAG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTPTIINVGYDETNYYLIGATEGFLMLDVGWPGSLAKLMAQLNRQAIAFTTIRYLLVTHYHPDHAGLVQELKAQGVQLVV IEQQRFAIPILKTYIKPQYHYQEITFDQTIVLRIEDTRQWLASIGIAGEIILTPGHSDDSVSLILDNGIAFIGDLHPYAN SDENPALIEQSWQELQKRGVTLLYPGHGGTRPLF
Sequences:
>Translated_194_residues MTPTIINVGYDETNYYLIGATEGFLMLDVGWPGSLAKLMAQLNRQAIAFTTIRYLLVTHYHPDHAGLVQELKAQGVQLVV IEQQRFAIPILKTYIKPQYHYQEITFDQTIVLRIEDTRQWLASIGIAGEIILTPGHSDDSVSLILDNGIAFIGDLHPYAN SDENPALIEQSWQELQKRGVTLLYPGHGGTRPLF >Mature_193_residues TPTIINVGYDETNYYLIGATEGFLMLDVGWPGSLAKLMAQLNRQAIAFTTIRYLLVTHYHPDHAGLVQELKAQGVQLVVI EQQRFAIPILKTYIKPQYHYQEITFDQTIVLRIEDTRQWLASIGIAGEIILTPGHSDDSVSLILDNGIAFIGDLHPYANS DENPALIEQSWQELQKRGVTLLYPGHGGTRPLF
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21790; Mature: 21659
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTIINVGYDETNYYLIGATEGFLMLDVGWPGSLAKLMAQLNRQAIAFTTIRYLLVTHY CCCEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHEEHHHEEC HPDHAGLVQELKAQGVQLVVIEQQRFAIPILKTYIKPQYHYQEITFDQTIVLRIEDTRQW CCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEEHHHHH LASIGIAGEIILTPGHSDDSVSLILDNGIAFIGDLHPYANSDENPALIEQSWQELQKRGV HHHCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC TLLYPGHGGTRPLF EEEECCCCCCCCCC >Mature Secondary Structure TPTIINVGYDETNYYLIGATEGFLMLDVGWPGSLAKLMAQLNRQAIAFTTIRYLLVTHY CCEEEECCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHEEHHHEEC HPDHAGLVQELKAQGVQLVVIEQQRFAIPILKTYIKPQYHYQEITFDQTIVLRIEDTRQW CCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEEHHHHH LASIGIAGEIILTPGHSDDSVSLILDNGIAFIGDLHPYANSDENPALIEQSWQELQKRGV HHHCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC TLLYPGHGGTRPLF EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA