Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901016

Identifier: 159901016

GI number: 159901016

Start: 5764419

End: 5766572

Strand: Reverse

Name: 159901016

Synonym: Haur_4503

Alternate gene names: NA

Gene position: 5766572-5764419 (Counterclockwise)

Preceding gene: 159901025

Following gene: 159901011

Centisome position: 90.86

GC content: 54.69

Gene sequence:

>2154_bases
ATGTTGCGTGGTTTGCGTTCGCGCTGGGGCACTCTTGGAGGGTTGTTGCTGTTGTGGCTGATTATTGGTTGGTGGGCGAA
TGCCCAACCAAGCCGCTCGGCCAATCTATTGCAGCATACTTCAACCAGCGTTGGCGGCTTGTATGGCCTTGAGCAATCGA
ATAGTTTGCCAGGCGCGACTGGCCCAACTACCCGCAGCTACCGCTGGAGCAATGGCAATTTACACGTGCCACTCTGGCCG
GCCAGCAACCACGCGCGGCTAGTTCAGCTTGAATATGTAGCCCCATTTGGCCCGACCAGCTTACAATTTGAGCAAACTCA
AGCCCTGAGCCTAGCGTTGCAACCTGAACTCCGCCAACTCAGCCTATTTGTGCCCGCCGATGTGCAACAATTGCAATTGC
GCAATCAGCCAAGCGAACAAGATGGACGCAACTTGGGTTTATTGCTCAGCCACCTCAGTTGGCAGGAACTTGGTTCAAAC
GGCTGGGCGGCTTTACCTGATGCTACGCCGTTTAATTCCAGCAATTTGGCCTTGCTCTGTGGCGTAGTGCTATTGCTTAG
CCTTGGCTGGGCGCGGCATTGGCTGGCACTCGCTGGCAGCGGCTTGAGCCTTGGCTTGGCGGCTTTAGCTTGGTCGGGCA
ATTGGCTCAATCGGGCGGCGATCAACAGCCTGAGCCAATTGTTACTGGTGGCAGCCTTGGCAGTTGGCGCATACCATATG
TGGCAGCGTTGGCCACGCCCAGTTAATTGGCGCTGGCTATTAGTGGCGATTTGGCTGATCACAACGCTCAGCCTGTGGAC
TCCAACGGTACAATATGATGGCGTTGGCTATTACGCCTATTTGCGTTCGGCGGGCATCGATCACGATTTTGATTTTAGCA
ACGAGTTTAGCCAAACTCCCTTAGAACTCAACACTGGGGTGAAATTGACCAAAACGGGCTATGCCGCCAATCCGTGGAGT
GTTGGCCCAGCCATGGCGTTCGCACCCTTGTGGTGGCTCGGCCATGGCATTACCCTGCTCGGTGGTTGGCCCAGCGATGG
CTATAGTCAACCGTATCTTGCTTTGACAACGTGGGGCAGCGCCTTAGCTGGATTAATCTTCATCCTAAGTTGCGAGGCAC
TGCTGCGCCGCCAATTTAGCCCTAAAATCGCCGCCCTAGCCACCATCAGTATCTATCTTGCTAGCAATTTGCTCTATTAC
AGTCTCTTTCAAGGAGCCTACGCCCACAGCCTTTCGGCGGCCTGCGTCAGTTTGATGGCGCTGGCCAGTCTACGGTTGCG
CGAACAACCAAGCCTTGGGCGTTGGGCGCAACTAGGCTTGAGCATGGGCGCAACGATTGTCAGCTATTGGATTGGTGCAT
TGGTGCTGATACTGCCAGCGCTGCTGCTTTGGCCGTTGCTGGTTGGCAAACAACGCCTAGCATGGCCGAATTTAATCAAA
GGTCTTGGCATCGCCGCGCTCGCTGGCTTGCTTGTGGTGTTGCCACAGTTGGCGATGTGGCGCTTGCTGTATGGCGCGTG
GCTGACAATTCCGCAAGGTGGCAATTTTGCCACACCGCGCAGCAGCCAACTTTGGCCAATGCTAGTTGGTTCGCTTTACG
GCATGCTCTGGTGGACACCAATCTATGTGCTAGGGTTGGTTGGCTTAGGCTTGAGCATTCGCCAACGGCAAGCTTGGCCG
TATCTGGCGGCAGTCATTATTTATTTGATTTATATTTCGCGTTTGCCTGATTGGCATGGCAGTGGAGCCTTTGGTTTACG
CCGTTTGACCACGCTTGCGCCTTGCTTGGCTTGGGGTGTGGCAGCCCTGCTGCACCGTTGGCGACACTGGCCGAGCACAG
CAATCGGCTTAATCGCAAGTTTGGTTGGCTGGAATTTAGCCTTGATGGCACGCTACATCACCTATGCGATTCCACGGGGC
TATCCAGCAATTGCCGAATTACCACTCAGCGCCATTTTGCTCTCCGACCAACCGCTAGAGGCCTCACGGCTTGGTTTATT
GATGCGCAATGGTTGGTTCGGCAGCCAACTGAGCAATCTTCAAGGGCGTAGTTTATGGGTGTTTTTGGGGCTTTTGGGTA
GTACTGCTGGGGTTTTGGCAATTTGGAGGTGGTTGGGGCGAGCCAACTCGCCAAGCCTAAATCAAGAGACTTAG

Upstream 100 bases:

>100_bases
ACCTCGATTAACTCGTACTTGGCGATTGCTCAGTTATCAACGTATTAGCAGATTCGGCTATCGGCTATACTAGGCCAAGC
ATTGTGTGTATAGGTGGATT

Downstream 100 bases:

>100_bases
CGAGTTAGCAAGGTTAATTGGCTCACTTGTGGGCATCGCGCAAAAAGCGGCGCACTACCTCGCGCACTGAATTTTTATCA
GTCGCGGTGCACAAATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MLRGLRSRWGTLGGLLLLWLIIGWWANAQPSRSANLLQHTSTSVGGLYGLEQSNSLPGATGPTTRSYRWSNGNLHVPLWP
ASNHARLVQLEYVAPFGPTSLQFEQTQALSLALQPELRQLSLFVPADVQQLQLRNQPSEQDGRNLGLLLSHLSWQELGSN
GWAALPDATPFNSSNLALLCGVVLLLSLGWARHWLALAGSGLSLGLAALAWSGNWLNRAAINSLSQLLLVAALAVGAYHM
WQRWPRPVNWRWLLVAIWLITTLSLWTPTVQYDGVGYYAYLRSAGIDHDFDFSNEFSQTPLELNTGVKLTKTGYAANPWS
VGPAMAFAPLWWLGHGITLLGGWPSDGYSQPYLALTTWGSALAGLIFILSCEALLRRQFSPKIAALATISIYLASNLLYY
SLFQGAYAHSLSAACVSLMALASLRLREQPSLGRWAQLGLSMGATIVSYWIGALVLILPALLLWPLLVGKQRLAWPNLIK
GLGIAALAGLLVVLPQLAMWRLLYGAWLTIPQGGNFATPRSSQLWPMLVGSLYGMLWWTPIYVLGLVGLGLSIRQRQAWP
YLAAVIIYLIYISRLPDWHGSGAFGLRRLTTLAPCLAWGVAALLHRWRHWPSTAIGLIASLVGWNLALMARYITYAIPRG
YPAIAELPLSAILLSDQPLEASRLGLLMRNGWFGSQLSNLQGRSLWVFLGLLGSTAGVLAIWRWLGRANSPSLNQET

Sequences:

>Translated_717_residues
MLRGLRSRWGTLGGLLLLWLIIGWWANAQPSRSANLLQHTSTSVGGLYGLEQSNSLPGATGPTTRSYRWSNGNLHVPLWP
ASNHARLVQLEYVAPFGPTSLQFEQTQALSLALQPELRQLSLFVPADVQQLQLRNQPSEQDGRNLGLLLSHLSWQELGSN
GWAALPDATPFNSSNLALLCGVVLLLSLGWARHWLALAGSGLSLGLAALAWSGNWLNRAAINSLSQLLLVAALAVGAYHM
WQRWPRPVNWRWLLVAIWLITTLSLWTPTVQYDGVGYYAYLRSAGIDHDFDFSNEFSQTPLELNTGVKLTKTGYAANPWS
VGPAMAFAPLWWLGHGITLLGGWPSDGYSQPYLALTTWGSALAGLIFILSCEALLRRQFSPKIAALATISIYLASNLLYY
SLFQGAYAHSLSAACVSLMALASLRLREQPSLGRWAQLGLSMGATIVSYWIGALVLILPALLLWPLLVGKQRLAWPNLIK
GLGIAALAGLLVVLPQLAMWRLLYGAWLTIPQGGNFATPRSSQLWPMLVGSLYGMLWWTPIYVLGLVGLGLSIRQRQAWP
YLAAVIIYLIYISRLPDWHGSGAFGLRRLTTLAPCLAWGVAALLHRWRHWPSTAIGLIASLVGWNLALMARYITYAIPRG
YPAIAELPLSAILLSDQPLEASRLGLLMRNGWFGSQLSNLQGRSLWVFLGLLGSTAGVLAIWRWLGRANSPSLNQET
>Mature_717_residues
MLRGLRSRWGTLGGLLLLWLIIGWWANAQPSRSANLLQHTSTSVGGLYGLEQSNSLPGATGPTTRSYRWSNGNLHVPLWP
ASNHARLVQLEYVAPFGPTSLQFEQTQALSLALQPELRQLSLFVPADVQQLQLRNQPSEQDGRNLGLLLSHLSWQELGSN
GWAALPDATPFNSSNLALLCGVVLLLSLGWARHWLALAGSGLSLGLAALAWSGNWLNRAAINSLSQLLLVAALAVGAYHM
WQRWPRPVNWRWLLVAIWLITTLSLWTPTVQYDGVGYYAYLRSAGIDHDFDFSNEFSQTPLELNTGVKLTKTGYAANPWS
VGPAMAFAPLWWLGHGITLLGGWPSDGYSQPYLALTTWGSALAGLIFILSCEALLRRQFSPKIAALATISIYLASNLLYY
SLFQGAYAHSLSAACVSLMALASLRLREQPSLGRWAQLGLSMGATIVSYWIGALVLILPALLLWPLLVGKQRLAWPNLIK
GLGIAALAGLLVVLPQLAMWRLLYGAWLTIPQGGNFATPRSSQLWPMLVGSLYGMLWWTPIYVLGLVGLGLSIRQRQAWP
YLAAVIIYLIYISRLPDWHGSGAFGLRRLTTLAPCLAWGVAALLHRWRHWPSTAIGLIASLVGWNLALMARYITYAIPRG
YPAIAELPLSAILLSDQPLEASRLGLLMRNGWFGSQLSNLQGRSLWVFLGLLGSTAGVLAIWRWLGRANSPSLNQET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78689; Mature: 78689

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLRSRWGTLGGLLLLWLIIGWWANAQPSRSANLLQHTSTSVGGLYGLEQSNSLPGAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCC
GPTTRSYRWSNGNLHVPLWPASNHARLVQLEYVAPFGPTSLQFEQTQALSLALQPELRQL
CCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEECCCHHHE
SLFVPADVQQLQLRNQPSEQDGRNLGLLLSHLSWQELGSNGWAALPDATPFNSSNLALLC
EEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHH
GVVLLLSLGWARHWLALAGSGLSLGLAALAWSGNWLNRAAINSLSQLLLVAALAVGAYHM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WQRWPRPVNWRWLLVAIWLITTLSLWTPTVQYDGVGYYAYLRSAGIDHDFDFSNEFSQTP
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
LELNTGVKLTKTGYAANPWSVGPAMAFAPLWWLGHGITLLGGWPSDGYSQPYLALTTWGS
EEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEHHHH
ALAGLIFILSCEALLRRQFSPKIAALATISIYLASNLLYYSLFQGAYAHSLSAACVSLMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASLRLREQPSLGRWAQLGLSMGATIVSYWIGALVLILPALLLWPLLVGKQRLAWPNLIK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
GLGIAALAGLLVVLPQLAMWRLLYGAWLTIPQGGNFATPRSSQLWPMLVGSLYGMLWWTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IYVLGLVGLGLSIRQRQAWPYLAAVIIYLIYISRLPDWHGSGAFGLRRLTTLAPCLAWGV
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AALLHRWRHWPSTAIGLIASLVGWNLALMARYITYAIPRGYPAIAELPLSAILLSDQPLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHEEECCCCCC
ASRLGLLMRNGWFGSQLSNLQGRSLWVFLGLLGSTAGVLAIWRWLGRANSPSLNQET
HHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLRGLRSRWGTLGGLLLLWLIIGWWANAQPSRSANLLQHTSTSVGGLYGLEQSNSLPGAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCC
GPTTRSYRWSNGNLHVPLWPASNHARLVQLEYVAPFGPTSLQFEQTQALSLALQPELRQL
CCCCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEECCCHHHE
SLFVPADVQQLQLRNQPSEQDGRNLGLLLSHLSWQELGSNGWAALPDATPFNSSNLALLC
EEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHH
GVVLLLSLGWARHWLALAGSGLSLGLAALAWSGNWLNRAAINSLSQLLLVAALAVGAYHM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WQRWPRPVNWRWLLVAIWLITTLSLWTPTVQYDGVGYYAYLRSAGIDHDFDFSNEFSQTP
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC
LELNTGVKLTKTGYAANPWSVGPAMAFAPLWWLGHGITLLGGWPSDGYSQPYLALTTWGS
EEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEHHHH
ALAGLIFILSCEALLRRQFSPKIAALATISIYLASNLLYYSLFQGAYAHSLSAACVSLMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASLRLREQPSLGRWAQLGLSMGATIVSYWIGALVLILPALLLWPLLVGKQRLAWPNLIK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
GLGIAALAGLLVVLPQLAMWRLLYGAWLTIPQGGNFATPRSSQLWPMLVGSLYGMLWWTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IYVLGLVGLGLSIRQRQAWPYLAAVIIYLIYISRLPDWHGSGAFGLRRLTTLAPCLAWGV
HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
AALLHRWRHWPSTAIGLIASLVGWNLALMARYITYAIPRGYPAIAELPLSAILLSDQPLE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHEEECCCCCC
ASRLGLLMRNGWFGSQLSNLQGRSLWVFLGLLGSTAGVLAIWRWLGRANSPSLNQET
HHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA