| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901005
Identifier: 159901005
GI number: 159901005
Start: 5752959
End: 5754158
Strand: Reverse
Name: 159901005
Synonym: Haur_4492
Alternate gene names: NA
Gene position: 5754158-5752959 (Counterclockwise)
Preceding gene: 159901006
Following gene: 159901003
Centisome position: 90.67
GC content: 54.33
Gene sequence:
>1200_bases ATGATGCGAATATTGTTGCTAACAGCCGAATATTTGCCCCAACCTGGGGGCGTTGGCGATTACACTGCCAAATTAGCCGA AGCCTTAACCGCGCTCGACTGTCAGGTTTGTGTACTCACTGCTGGCGAAGGTGCTGAACAAAGCGAGCCATGGCTGGTTT GGCGCAGGGTGCGCGGCTGGGGCCGTAAGCTGCATCAGGATGTGCGCAACGCTGCCAAGCAATTCGAGGCCGATATTGTG CATATTCAATATCAAACTGGCGCATACGAAATGAAGCCTGCGGTCAATTTGCTACCTGCGGCGCTCTCGGTGCCAAGTGT GGTAACCCTGCACGATTTGCGTATGCCCTATTTGGCTCCCAAAGTTGCGCCGTTGCGCCGCTATGTTACCCGTTTGCTAA TCGAAAATGCTCATGCCGTGGTGGTTACCAATGCCGAGGATGAATCGCGCTTGGCTGGCGATGCACCCAGCAGCAATCCC GATATTTATACCCTGACCCAGCCATTGGAGCCACCAGCCCACTTAATTCCAATTGGCGCGAATATCGAGGTTGCGCCATT AGCCGACCGCCAGCAGCTACGCCAGCAGTTGGGAGCCAACTCCGAAACGCTGTTATTGGGCTATTTTGGCTTGCTCAACA GCACCAAAGGCGTGCACACCATCGTTGAATCGTTGCAATATTTGCCAGCAACTACCCGCCTCGTGATTATCGGCGGCGGC ACAGGCACGCCCGAAGATGAAACCTATGCCGAACAATTACGCGCCACAATTAGCCGTCTCGGGCTTGATCAGCGTATCCA TTGGACGGGCTACCTGAGTGCCAGCGAGGTTTCCCGTACCATGCAAGCGCTCGATTGCGCGGCCCTGCCATTTAGCGATG GTGCATCGTATCGTCGGGGTAGTTTGTTGGCGATGCTAGCCCATGGCGTGCCCACAATCACCACCCCGCCGCATGTGCCA ATCGATCCTTCACTGCGCCATGAACGTGATGTGCTATTAGTCGAGCCAGATGATGCCATTAATTTGGCTTTGGCAGTTGA GCAAATCGCCGCCAACCCCGAATTACGCCAACAATTGAGCCAAGCAGGCCAGCGCATCGCCTGCTCATTTCGCTGGGAAA CCATCGCTCAATTGCATACGACGCTCTATCAACAACTGCTCGATGCACAACAAAACAAGCAAGAGCAGATCGATTTTTAG
Upstream 100 bases:
>100_bases GAAATAGCTGGGCAATCAGCGCTGCGGGGTCTAGCCCAGCAATCTGCTAACCAAGGAGTAAAGGTTGGGCTGCGGCCTTG CTGCTAGCCACCGAGAATAC
Downstream 100 bases:
>100_bases CACATTTTCTCGCCTCGCTCCCCACGTGAGGCGAGAAAATACTGATTAATTCATTGCGTTTACGCAATAACTGGTTGCAC CAACTTCAACTGTTGCTCCC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Sucrose-Phosphate Synthase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MMRILLLTAEYLPQPGGVGDYTAKLAEALTALDCQVCVLTAGEGAEQSEPWLVWRRVRGWGRKLHQDVRNAAKQFEADIV HIQYQTGAYEMKPAVNLLPAALSVPSVVTLHDLRMPYLAPKVAPLRRYVTRLLIENAHAVVVTNAEDESRLAGDAPSSNP DIYTLTQPLEPPAHLIPIGANIEVAPLADRQQLRQQLGANSETLLLGYFGLLNSTKGVHTIVESLQYLPATTRLVIIGGG TGTPEDETYAEQLRATISRLGLDQRIHWTGYLSASEVSRTMQALDCAALPFSDGASYRRGSLLAMLAHGVPTITTPPHVP IDPSLRHERDVLLVEPDDAINLALAVEQIAANPELRQQLSQAGQRIACSFRWETIAQLHTTLYQQLLDAQQNKQEQIDF
Sequences:
>Translated_399_residues MMRILLLTAEYLPQPGGVGDYTAKLAEALTALDCQVCVLTAGEGAEQSEPWLVWRRVRGWGRKLHQDVRNAAKQFEADIV HIQYQTGAYEMKPAVNLLPAALSVPSVVTLHDLRMPYLAPKVAPLRRYVTRLLIENAHAVVVTNAEDESRLAGDAPSSNP DIYTLTQPLEPPAHLIPIGANIEVAPLADRQQLRQQLGANSETLLLGYFGLLNSTKGVHTIVESLQYLPATTRLVIIGGG TGTPEDETYAEQLRATISRLGLDQRIHWTGYLSASEVSRTMQALDCAALPFSDGASYRRGSLLAMLAHGVPTITTPPHVP IDPSLRHERDVLLVEPDDAINLALAVEQIAANPELRQQLSQAGQRIACSFRWETIAQLHTTLYQQLLDAQQNKQEQIDF >Mature_399_residues MMRILLLTAEYLPQPGGVGDYTAKLAEALTALDCQVCVLTAGEGAEQSEPWLVWRRVRGWGRKLHQDVRNAAKQFEADIV HIQYQTGAYEMKPAVNLLPAALSVPSVVTLHDLRMPYLAPKVAPLRRYVTRLLIENAHAVVVTNAEDESRLAGDAPSSNP DIYTLTQPLEPPAHLIPIGANIEVAPLADRQQLRQQLGANSETLLLGYFGLLNSTKGVHTIVESLQYLPATTRLVIIGGG TGTPEDETYAEQLRATISRLGLDQRIHWTGYLSASEVSRTMQALDCAALPFSDGASYRRGSLLAMLAHGVPTITTPPHVP IDPSLRHERDVLLVEPDDAINLALAVEQIAANPELRQQLSQAGQRIACSFRWETIAQLHTTLYQQLLDAQQNKQEQIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43874; Mature: 43874
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRILLLTAEYLPQPGGVGDYTAKLAEALTALDCQVCVLTAGEGAEQSEPWLVWRRVRGW CEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH GRKLHQDVRNAAKQFEADIVHIQYQTGAYEMKPAVNLLPAALSVPSVVTLHDLRMPYLAP HHHHHHHHHHHHHHHCCEEEEEEEECCCEECCCHHHHHHHHHCCCCEEEHHHCCCCHHCC KVAPLRRYVTRLLIENAHAVVVTNAEDESRLAGDAPSSNPDIYTLTQPLEPPAHLIPIGA CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECC NIEVAPLADRQQLRQQLGANSETLLLGYFGLLNSTKGVHTIVESLQYLPATTRLVIIGGG CEEEECCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECC TGTPEDETYAEQLRATISRLGLDQRIHWTGYLSASEVSRTMQALDCAALPFSDGASYRRG CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCC SLLAMLAHGVPTITTPPHVPIDPSLRHERDVLLVEPDDAINLALAVEQIAANPELRQQLS HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHH QAGQRIACSFRWETIAQLHTTLYQQLLDAQQNKQEQIDF HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MMRILLLTAEYLPQPGGVGDYTAKLAEALTALDCQVCVLTAGEGAEQSEPWLVWRRVRGW CEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH GRKLHQDVRNAAKQFEADIVHIQYQTGAYEMKPAVNLLPAALSVPSVVTLHDLRMPYLAP HHHHHHHHHHHHHHHCCEEEEEEEECCCEECCCHHHHHHHHHCCCCEEEHHHCCCCHHCC KVAPLRRYVTRLLIENAHAVVVTNAEDESRLAGDAPSSNPDIYTLTQPLEPPAHLIPIGA CHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECC NIEVAPLADRQQLRQQLGANSETLLLGYFGLLNSTKGVHTIVESLQYLPATTRLVIIGGG CEEEECCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECC TGTPEDETYAEQLRATISRLGLDQRIHWTGYLSASEVSRTMQALDCAALPFSDGASYRRG CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCC SLLAMLAHGVPTITTPPHVPIDPSLRHERDVLLVEPDDAINLALAVEQIAANPELRQQLS HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHH QAGQRIACSFRWETIAQLHTTLYQQLLDAQQNKQEQIDF HCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA