| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900969
Identifier: 159900969
GI number: 159900969
Start: 5698162
End: 5698629
Strand: Reverse
Name: 159900969
Synonym: Haur_4456
Alternate gene names: NA
Gene position: 5698629-5698162 (Counterclockwise)
Preceding gene: 159900970
Following gene: 159900968
Centisome position: 89.79
GC content: 46.79
Gene sequence:
>468_bases GTGGGCCAACTTCTCGATGGAGCTGCATTTTTGAGCCAAACCAATGCCATGCAAGCAACCCTTCGCCAATTAATCGGCGG AGCTTTGTGGTTTCACGGCCCAAGCTGTGATCTCGAAAGCTTCGTTATTCGCGTTGGCGAGCCGCGCACGCGAGAAATTC AATATTATCAATTAACCATCAACTGTGCTTGGCGTTTGCGTCAGCAGCAACAAATCTTACTCAGTAGCGAAGATTGGCTG TATGACGACGATAATAATATCGAATTTGAACCAAGCGTTGCGAAATTTTGGGCCAAGCACGATCCCGCCAGTTTAATTAT TTGGTCGATTGAAGTAAAACCGCAGAGTGGCGATCTCTGCTTTTCGATCAATTATGATTATAAACTCGACATTCTGATCA ATGCCGCAGCCGGTCAACATTGGGTTTTGCACCGCGATGGACTCGAAATTTGGCGTTATCGCAGCTAG
Upstream 100 bases:
>100_bases AGAGATTAGTTGGGATGGTCATCCAATCTCACTTGGCAATTGGGTTCCATGTTTAATTCAGTCGTTGGTTGTAAAATAAA ATCTATCTATTCTAACTAAT
Downstream 100 bases:
>100_bases GGGTTTATGCACGAAATTTCGACCATTCAACAAAAACTGGCAGCCTTGCTTGGCCAAGTGCTGTGGGATGGCTTTGAGGT TGCAGGCATTTTATGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGQLLDGAAFLSQTNAMQATLRQLIGGALWFHGPSCDLESFVIRVGEPRTREIQYYQLTINCAWRLRQQQQILLSSEDWL YDDDNNIEFEPSVAKFWAKHDPASLIIWSIEVKPQSGDLCFSINYDYKLDILINAAAGQHWVLHRDGLEIWRYRS
Sequences:
>Translated_155_residues MGQLLDGAAFLSQTNAMQATLRQLIGGALWFHGPSCDLESFVIRVGEPRTREIQYYQLTINCAWRLRQQQQILLSSEDWL YDDDNNIEFEPSVAKFWAKHDPASLIIWSIEVKPQSGDLCFSINYDYKLDILINAAAGQHWVLHRDGLEIWRYRS >Mature_154_residues GQLLDGAAFLSQTNAMQATLRQLIGGALWFHGPSCDLESFVIRVGEPRTREIQYYQLTINCAWRLRQQQQILLSSEDWLY DDDNNIEFEPSVAKFWAKHDPASLIIWSIEVKPQSGDLCFSINYDYKLDILINAAAGQHWVLHRDGLEIWRYRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17962; Mature: 17830
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQLLDGAAFLSQTNAMQATLRQLIGGALWFHGPSCDLESFVIRVGEPRTREIQYYQLTI CCCCCCHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEE NCAWRLRQQQQILLSSEDWLYDDDNNIEFEPSVAKFWAKHDPASLIIWSIEVKPQSGDLC EEEEEECCCCEEEECCCCCEEECCCCEEECCHHHHHHCCCCCCEEEEEEEEEECCCCCEE FSINYDYKLDILINAAAGQHWVLHRDGLEIWRYRS EEECCCEEEEEEEECCCCCEEEEEECCCEEEEECC >Mature Secondary Structure GQLLDGAAFLSQTNAMQATLRQLIGGALWFHGPSCDLESFVIRVGEPRTREIQYYQLTI CCCCCHHHHHHHCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEE NCAWRLRQQQQILLSSEDWLYDDDNNIEFEPSVAKFWAKHDPASLIIWSIEVKPQSGDLC EEEEEECCCCEEEECCCCCEEECCCCEEECCHHHHHHCCCCCCEEEEEEEEEECCCCCEE FSINYDYKLDILINAAAGQHWVLHRDGLEIWRYRS EEECCCEEEEEEEECCCCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA