Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900970

Identifier: 159900970

GI number: 159900970

Start: 5698651

End: 5699310

Strand: Reverse

Name: 159900970

Synonym: Haur_4457

Alternate gene names: NA

Gene position: 5699310-5698651 (Counterclockwise)

Preceding gene: 159900972

Following gene: 159900969

Centisome position: 89.8

GC content: 43.94

Gene sequence:

>660_bases
ATGACCCACCAACAAACATATATCAACCTTGGGTATTATCTTTCACACGAAGGGTCGTCTTGTGATCACAACAATATCAC
AACCCCTGAATTTTTCTTTACCCAAGATGAACAACAGCCATTAGTGCTTGATCCGATTTGTCTTGATAAAATCAGCAATG
TTGGGGCAGCAACCGATTTGCTCGGCCAAAAGCTCGACGCAGGATTTGAGTTTCCATATGTATTTACCACGTTTGAGCTA
GCGTTGGAATTTGTTGAACGTTTTTGTAGCAAACGCTATCAATGGCAAATTATAGGGATTGCCCTGCCGAAACAGTTTGT
TGCAAGCTCTTTGGCGGCGGTTGAAGCATTATATACCCAGCCCAAGCCAGCCTTGTATGCTATGCTGCAAGCCCAACAAG
CGCCACACCCAGCCATGCAGCCTCTTGGCTTTGATATCCTCTCGTTTGACATTTTTTGTTGGGAATCATATCTGTATCGC
AACGTCTTGCCGCAAAAACCAATCTTGCTTGATTTAAATCAGCATCAGCTCATCGAAGACTACTCCGAAGCGGTACGGCT
TACGCGTCGAATCATCAATCGAGAGATTAGTTGGGATGGTCATCCAATCTCACTTGGCAATTGGGTTCCATGTTTAATTC
AGTCGTTGGTTGTAAAATAA

Upstream 100 bases:

>100_bases
ACGCAGCCTTTAATTCATTCGTTGGTTGTAGATTAAATGCCGCTGCATCCAGCATAATTTGGCTGCACGGCTCACCAAGT
TTAGGCTTGAGAGGAATTCG

Downstream 100 bases:

>100_bases
AATCTATCTATTCTAACTAATGTGGGCCAACTTCTCGATGGAGCTGCATTTTTGAGCCAAACCAATGCCATGCAAGCAAC
CCTTCGCCAATTAATCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFEL
ALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYR
NVLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK

Sequences:

>Translated_219_residues
MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFEL
ALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYR
NVLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK
>Mature_218_residues
THQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDLLGQKLDAGFEFPYVFTTFELA
LEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQPKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRN
VLPQKPILLDLNQHQLIEDYSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25104; Mature: 24973

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDL
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHH
LGQKLDAGFEFPYVFTTFELALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC
PKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRNVLPQKPILLDLNQHQLIED
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
YSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK
HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
THQQTYINLGYYLSHEGSSCDHNNITTPEFFFTQDEQQPLVLDPICLDKISNVGAATDL
CCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCCCHHHHH
LGQKLDAGFEFPYVFTTFELALEFVERFCSKRYQWQIIGIALPKQFVASSLAAVEALYTQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC
PKPALYAMLQAQQAPHPAMQPLGFDILSFDIFCWESYLYRNVLPQKPILLDLNQHQLIED
CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
YSEAVRLTRRIINREISWDGHPISLGNWVPCLIQSLVVK
HHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA