| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900968
Identifier: 159900968
GI number: 159900968
Start: 5697673
End: 5698155
Strand: Reverse
Name: 159900968
Synonym: Haur_4455
Alternate gene names: NA
Gene position: 5698155-5697673 (Counterclockwise)
Preceding gene: 159900969
Following gene: 159900967
Centisome position: 89.78
GC content: 45.13
Gene sequence:
>483_bases ATGCACGAAATTTCGACCATTCAACAAAAACTGGCAGCCTTGCTTGGCCAAGTGCTGTGGGATGGCTTTGAGGTTGCAGG CATTTTATGCTTACGGATTGGCGAAAAGCGCCTGATTACCAACCGCAAGCAGCAAGAAGTTGAGATTGGGCGTTATAGTT TGCACATTAGTGGCGTATGGCGCTTCTGGCAGCACCAACAGCTCATTATTGCCGATGGCGATTGGGCGCAGCCTGATCCG GCGGGAGTTGAGCCTTCAGCCTTACATCGTTTTTTACACACATTTTGGCCACAATCCTTGTTTATCCGCAGCATTCAACT TAATTCTATCGGCGATGTTCAATTGCATTTGAGCCAAGGTTATTGCTTAGAATTATTGATTAGTTCAACTAATAACGAAT ATTGGCGCTTGATCGATAATGATACCGACGAGCATTTTATCGTTGAAGCACATGATGACGACGATTCAACCGAGAATTCA TAG
Upstream 100 bases:
>100_bases TGATTATAAACTCGACATTCTGATCAATGCCGCAGCCGGTCAACATTGGGTTTTGCACCGCGATGGACTCGAAATTTGGC GTTATCGCAGCTAGGGGTTT
Downstream 100 bases:
>100_bases AATAAGAGGAGATTTACAAAATGCAGTGGTACGATTGTGGGTATCTGGTTATGACACGCATTCAGCGACCATCAGATCTT GATCCGCTACTTTTTCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MHEISTIQQKLAALLGQVLWDGFEVAGILCLRIGEKRLITNRKQQEVEIGRYSLHISGVWRFWQHQQLIIADGDWAQPDP AGVEPSALHRFLHTFWPQSLFIRSIQLNSIGDVQLHLSQGYCLELLISSTNNEYWRLIDNDTDEHFIVEAHDDDDSTENS
Sequences:
>Translated_160_residues MHEISTIQQKLAALLGQVLWDGFEVAGILCLRIGEKRLITNRKQQEVEIGRYSLHISGVWRFWQHQQLIIADGDWAQPDP AGVEPSALHRFLHTFWPQSLFIRSIQLNSIGDVQLHLSQGYCLELLISSTNNEYWRLIDNDTDEHFIVEAHDDDDSTENS >Mature_160_residues MHEISTIQQKLAALLGQVLWDGFEVAGILCLRIGEKRLITNRKQQEVEIGRYSLHISGVWRFWQHQQLIIADGDWAQPDP AGVEPSALHRFLHTFWPQSLFIRSIQLNSIGDVQLHLSQGYCLELLISSTNNEYWRLIDNDTDEHFIVEAHDDDDSTENS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18449; Mature: 18449
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEISTIQQKLAALLGQVLWDGFEVAGILCLRIGEKRLITNRKQQEVEIGRYSLHISGVW CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCHHHEEECEEEEEEHHHH RFWQHQQLIIADGDWAQPDPAGVEPSALHRFLHTFWPQSLFIRSIQLNSIGDVQLHLSQG HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEECCCCCCEEEEECCC YCLELLISSTNNEYWRLIDNDTDEHFIVEAHDDDDSTENS CEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MHEISTIQQKLAALLGQVLWDGFEVAGILCLRIGEKRLITNRKQQEVEIGRYSLHISGVW CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCHHHEEECEEEEEEHHHH RFWQHQQLIIADGDWAQPDPAGVEPSALHRFLHTFWPQSLFIRSIQLNSIGDVQLHLSQG HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEECCCCCCEEEEECCC YCLELLISSTNNEYWRLIDNDTDEHFIVEAHDDDDSTENS CEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA