Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900967

Identifier: 159900967

GI number: 159900967

Start: 5696924

End: 5697652

Strand: Reverse

Name: 159900967

Synonym: Haur_4454

Alternate gene names: NA

Gene position: 5697652-5696924 (Counterclockwise)

Preceding gene: 159900968

Following gene: 159900966

Centisome position: 89.78

GC content: 43.48

Gene sequence:

>729_bases
ATGCAGTGGTACGATTGTGGGTATCTGGTTATGACACGCATTCAGCGACCATCAGATCTTGATCCGCTACTTTTTCCAGA
AACCATGTATGCGTTGCGCGATTGTAGTTTTAATGCGCTGCCTGAGCACTGGTGGCGTTATTTTAGCGCCGATCCAAGCA
ATCTGCTGGCGAAAGAATTGGCTGACTGGTATACAAAAAACGAAGCTGGATTATTGCTGCCCAATCTATTTACTACGATT
GAATTAGCTCAAGAATTTGCCCAAAAATTATCAAATTGGCCTGAAGAATTACAGATTGTTAGAATTGGCTTAGCAGCAGC
GTATCACGAGCAATTTATGGCTGAACAAACTGCAAAACGACCAAGTGAGCAACCAGAAGGATTTTTAACCATGCTTCAGC
AGCCTAAGCAATTGCCAATTCAACAGGGTCAGTGGCTTGGGGTTGAGTTAGGCTGGTTCAATTATAGCAGTATTCACTCA
TGGGTCTGCGAATCAGAGCATCAACGATTGATTCAACATGACGCGCCTGTGGATTGTCGGCCAAATCAATTTGGGTTACT
CAAAAGCCTTGCTGCTGCCGAATACTTGATTCCACAGATTTCGATCTACAACGGGATCAATGATGATACCCCAGCGCCGA
ACGTTTACCCATTTTGCTTGATTGCCTATGAACCATCATTAATGAATACCAAACTTCATATGCCAAATCTTGCTACCAGC
AACAACTAA

Upstream 100 bases:

>100_bases
GGCGCTTGATCGATAATGATACCGACGAGCATTTTATCGTTGAAGCACATGATGACGACGATTCAACCGAGAATTCATAG
AATAAGAGGAGATTTACAAA

Downstream 100 bases:

>100_bases
ATGTGGATCGCCCCTCGGTTAGCCTCGGACTTTGGTAGGAGCCAGCAACCGAGGCTTTTTGCTATGCTTAGACCAGCTAT
TTTGCCACTGAGAGATGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MQWYDCGYLVMTRIQRPSDLDPLLFPETMYALRDCSFNALPEHWWRYFSADPSNLLAKELADWYTKNEAGLLLPNLFTTI
ELAQEFAQKLSNWPEELQIVRIGLAAAYHEQFMAEQTAKRPSEQPEGFLTMLQQPKQLPIQQGQWLGVELGWFNYSSIHS
WVCESEHQRLIQHDAPVDCRPNQFGLLKSLAAAEYLIPQISIYNGINDDTPAPNVYPFCLIAYEPSLMNTKLHMPNLATS
NN

Sequences:

>Translated_242_residues
MQWYDCGYLVMTRIQRPSDLDPLLFPETMYALRDCSFNALPEHWWRYFSADPSNLLAKELADWYTKNEAGLLLPNLFTTI
ELAQEFAQKLSNWPEELQIVRIGLAAAYHEQFMAEQTAKRPSEQPEGFLTMLQQPKQLPIQQGQWLGVELGWFNYSSIHS
WVCESEHQRLIQHDAPVDCRPNQFGLLKSLAAAEYLIPQISIYNGINDDTPAPNVYPFCLIAYEPSLMNTKLHMPNLATS
NN
>Mature_242_residues
MQWYDCGYLVMTRIQRPSDLDPLLFPETMYALRDCSFNALPEHWWRYFSADPSNLLAKELADWYTKNEAGLLLPNLFTTI
ELAQEFAQKLSNWPEELQIVRIGLAAAYHEQFMAEQTAKRPSEQPEGFLTMLQQPKQLPIQQGQWLGVELGWFNYSSIHS
WVCESEHQRLIQHDAPVDCRPNQFGLLKSLAAAEYLIPQISIYNGINDDTPAPNVYPFCLIAYEPSLMNTKLHMPNLATS
NN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27899; Mature: 27899

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWYDCGYLVMTRIQRPSDLDPLLFPETMYALRDCSFNALPEHWWRYFSADPSNLLAKEL
CCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
ADWYTKNEAGLLLPNLFTTIELAQEFAQKLSNWPEELQIVRIGLAAAYHEQFMAEQTAKR
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSEQPEGFLTMLQQPKQLPIQQGQWLGVELGWFNYSSIHSWVCESEHQRLIQHDAPVDCR
CCCCCHHHHHHHHCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PNQFGLLKSLAAAEYLIPQISIYNGINDDTPAPNVYPFCLIAYEPSLMNTKLHMPNLATS
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHCCEECCCCCCCC
NN
CC
>Mature Secondary Structure
MQWYDCGYLVMTRIQRPSDLDPLLFPETMYALRDCSFNALPEHWWRYFSADPSNLLAKEL
CCEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHH
ADWYTKNEAGLLLPNLFTTIELAQEFAQKLSNWPEELQIVRIGLAAAYHEQFMAEQTAKR
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSEQPEGFLTMLQQPKQLPIQQGQWLGVELGWFNYSSIHSWVCESEHQRLIQHDAPVDCR
CCCCCHHHHHHHHCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PNQFGLLKSLAAAEYLIPQISIYNGINDDTPAPNVYPFCLIAYEPSLMNTKLHMPNLATS
CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHCCEECCCCCCCC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA