| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900928
Identifier: 159900928
GI number: 159900928
Start: 5637074
End: 5637583
Strand: Direct
Name: 159900928
Synonym: Haur_4415
Alternate gene names: NA
Gene position: 5637074-5637583 (Clockwise)
Preceding gene: 159900927
Following gene: 159900929
Centisome position: 88.82
GC content: 47.45
Gene sequence:
>510_bases ATGAGCTTTTTTCGGCAACGTAGATCATTAATTGTGCTGAGCTTGCTGAACATCGGCTTATTACTCACAACATGGTGGCT TTTATGGCGGCTTTTGGGTTTAGAACTAACGGCATTGCCTAGCTCATGGCGGCAACAAGCCCCAAGCTGGACTGATGGCC AAAAAGTTACGGCGTTTTTCTTGCTAAGTTTGGGTTTAACCCTGCCACGCATGCTCTGGCAATTACTCTTGGAGTGGAAC ACCAGCTATCAAGTTGAGGCTGATGGGCTGACAATTCGCACGCTGGGCTTGCTGCAATATTATCCATGGCAGGCGTTGGC CCAATTACGGCCAAATTATAGCTATGACGATTATGTGCAGCGAATTGATGTGCTGATTGCGCCAGAATTTAGCCAAACTC GTTGGTATCGGCGCTGGTTTTATCGCCATTACTACAACAAAGTGCCGTTATATGCCACATCGGGGCAACTCGTGAGCTTG CTAAGCCAAATTAAACGGCATTGTGGCTAA
Upstream 100 bases:
>100_bases ACGAGCCAACAACGCCACCACAACAAATGTCAATGTTTTAAGGTCTCACCGCCGAAACCCCAGAACATCCGATTGATTGC TAGACCTAGAAGGATGCTGA
Downstream 100 bases:
>100_bases CATGGGCTTTTGGGCAATTGCGCAAAGGCTTGATCTGAAGAACTGCTACTCATCGTTATGTGGAGTGGTACAAGAAAATT CTATTTAACAACTATCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWN TSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSL LSQIKRHCG
Sequences:
>Translated_169_residues MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWN TSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSL LSQIKRHCG >Mature_168_residues SFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWNT SYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLL SQIKRHCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20153; Mature: 20022
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCHHHHHHH LLSLGLTLPRMLWQLLLEWNTSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCHHHHHHHCCCCCHHHHHH RIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLLSQIKRHCG HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure SFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCHHHHHHH LLSLGLTLPRMLWQLLLEWNTSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQ HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCHHHHHHHCCCCCHHHHHH RIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLLSQIKRHCG HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA