The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900928

Identifier: 159900928

GI number: 159900928

Start: 5637074

End: 5637583

Strand: Direct

Name: 159900928

Synonym: Haur_4415

Alternate gene names: NA

Gene position: 5637074-5637583 (Clockwise)

Preceding gene: 159900927

Following gene: 159900929

Centisome position: 88.82

GC content: 47.45

Gene sequence:

>510_bases
ATGAGCTTTTTTCGGCAACGTAGATCATTAATTGTGCTGAGCTTGCTGAACATCGGCTTATTACTCACAACATGGTGGCT
TTTATGGCGGCTTTTGGGTTTAGAACTAACGGCATTGCCTAGCTCATGGCGGCAACAAGCCCCAAGCTGGACTGATGGCC
AAAAAGTTACGGCGTTTTTCTTGCTAAGTTTGGGTTTAACCCTGCCACGCATGCTCTGGCAATTACTCTTGGAGTGGAAC
ACCAGCTATCAAGTTGAGGCTGATGGGCTGACAATTCGCACGCTGGGCTTGCTGCAATATTATCCATGGCAGGCGTTGGC
CCAATTACGGCCAAATTATAGCTATGACGATTATGTGCAGCGAATTGATGTGCTGATTGCGCCAGAATTTAGCCAAACTC
GTTGGTATCGGCGCTGGTTTTATCGCCATTACTACAACAAAGTGCCGTTATATGCCACATCGGGGCAACTCGTGAGCTTG
CTAAGCCAAATTAAACGGCATTGTGGCTAA

Upstream 100 bases:

>100_bases
ACGAGCCAACAACGCCACCACAACAAATGTCAATGTTTTAAGGTCTCACCGCCGAAACCCCAGAACATCCGATTGATTGC
TAGACCTAGAAGGATGCTGA

Downstream 100 bases:

>100_bases
CATGGGCTTTTGGGCAATTGCGCAAAGGCTTGATCTGAAGAACTGCTACTCATCGTTATGTGGAGTGGTACAAGAAAATT
CTATTTAACAACTATCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWN
TSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSL
LSQIKRHCG

Sequences:

>Translated_169_residues
MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWN
TSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSL
LSQIKRHCG
>Mature_168_residues
SFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFFLLSLGLTLPRMLWQLLLEWNT
SYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQRIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLL
SQIKRHCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20153; Mature: 20022

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCHHHHHHH
LLSLGLTLPRMLWQLLLEWNTSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQ
HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCHHHHHHHCCCCCHHHHHH
RIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLLSQIKRHCG
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFFRQRRSLIVLSLLNIGLLLTTWWLLWRLLGLELTALPSSWRQQAPSWTDGQKVTAFF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCCCCHHHHHHH
LLSLGLTLPRMLWQLLLEWNTSYQVEADGLTIRTLGLLQYYPWQALAQLRPNYSYDDYVQ
HHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCHHHHHHHCCCCCHHHHHH
RIDVLIAPEFSQTRWYRRWFYRHYYNKVPLYATSGQLVSLLSQIKRHCG
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA