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The map label for this gene is 159900927

Identifier: 159900927

GI number: 159900927

Start: 5636352

End: 5637014

Strand: Direct

Name: 159900927

Synonym: Haur_4414

Alternate gene names: NA

Gene position: 5636352-5637014 (Clockwise)

Preceding gene: 159900926

Following gene: 159900928

Centisome position: 88.81

GC content: 52.04

Gene sequence:

>663_bases
ATGACGCATGCAGCAGCAACACTTGCGGCCATTGCTGAAGAAGTCGCCCAATGCACTGCCTGCCCGCTCTGTCGCACCCG
AACCAATGCAGTGCCAGGCGAAGGCCCAGCCAATGCCGAGATTTTATTAATTGGAGAAGGGCCAGGCCAACGTGAAGATG
CACTTGGTCGGCCTTTCGTCGGGCCTTCGGGCGATTTGTTGGAACAATGGTTGGCCGAAATTGGCCTAACCCGCGAACAA
GTCTTTATCGCCAATGTGGTGAAATGTCGGCCACCTGGCAACCGCGACCCTGAGCCAAGCGAAATCGCTGCTTGTGCCCA
TTTTTTGGATCGCCAGATTGCGGCTTTGGCTCCCAAGTTGATAGCGACGCTTGGGCGGCATTCGATGAACAAATTTTTTC
CTGGTGGCAAAATTACCAAAATTCATGGCATTCGTGGGGTTAAACGCCAAGGCCAAACGGTATTTCTGCCCTTATTTCAC
CCAGCCTATGTGCTGCGTAACATGAACGCCATGCCCGATGCAATTGCCGATATCAAGTTGATACCACGGCTGATTGCGCG
GCTCAACCAGCGTTTGCAAGAAGAAACTAACGAAACAACTGAGCCAAATTTGCCCGAAACCGACGAGCCAACAACGCCAC
CACAACAAATGTCAATGTTTTAA

Upstream 100 bases:

>100_bases
GTCGAATAGCTAGCCTATCGAGAATCAGACAAGCCTAAATTCGTGTACAATATCAACACATGATTCTTAGGTTGTTGAAT
CCTGAGTTTAATTTGCGCTT

Downstream 100 bases:

>100_bases
GGTCTCACCGCCGAAACCCCAGAACATCCGATTGATTGCTAGACCTAGAAGGATGCTGAATGAGCTTTTTTCGGCAACGT
AGATCATTAATTGTGCTGAG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Uracil DNA Glycosylase; DNA Polymerase-Related Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Glycosylase; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTHAAATLAAIAEEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFVGPSGDLLEQWLAEIGLTREQ
VFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKLIATLGRHSMNKFFPGGKITKIHGIRGVKRQGQTVFLPLFH
PAYVLRNMNAMPDAIADIKLIPRLIARLNQRLQEETNETTEPNLPETDEPTTPPQQMSMF

Sequences:

>Translated_220_residues
MTHAAATLAAIAEEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFVGPSGDLLEQWLAEIGLTREQ
VFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKLIATLGRHSMNKFFPGGKITKIHGIRGVKRQGQTVFLPLFH
PAYVLRNMNAMPDAIADIKLIPRLIARLNQRLQEETNETTEPNLPETDEPTTPPQQMSMF
>Mature_219_residues
THAAATLAAIAEEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFVGPSGDLLEQWLAEIGLTREQV
FIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKLIATLGRHSMNKFFPGGKITKIHGIRGVKRQGQTVFLPLFHP
AYVLRNMNAMPDAIADIKLIPRLIARLNQRLQEETNETTEPNLPETDEPTTPPQQMSMF

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23956; Mature: 23825

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHAAATLAAIAEEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFV
CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCC
GPSGDLLEQWLAEIGLTREQVFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IATLGRHSMNKFFPGGKITKIHGIRGVKRQGQTVFLPLFHPAYVLRNMNAMPDAIADIKL
HHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHH
IPRLIARLNQRLQEETNETTEPNLPETDEPTTPPQQMSMF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
THAAATLAAIAEEVAQCTACPLCRTRTNAVPGEGPANAEILLIGEGPGQREDALGRPFV
CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCC
GPSGDLLEQWLAEIGLTREQVFIANVVKCRPPGNRDPEPSEIAACAHFLDRQIAALAPKL
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IATLGRHSMNKFFPGGKITKIHGIRGVKRQGQTVFLPLFHPAYVLRNMNAMPDAIADIKL
HHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHH
IPRLIARLNQRLQEETNETTEPNLPETDEPTTPPQQMSMF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA