The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900915

Identifier: 159900915

GI number: 159900915

Start: 5626104

End: 5626847

Strand: Reverse

Name: 159900915

Synonym: Haur_4402

Alternate gene names: NA

Gene position: 5626847-5626104 (Counterclockwise)

Preceding gene: 159900916

Following gene: 159900913

Centisome position: 88.66

GC content: 48.79

Gene sequence:

>744_bases
ATGCAAACAATGTGGATGCTCGCAGCAGGCGATTTGCTGACATTTTCCTTGACTACCGCTGCTCTGTGGTGGCTTACCAG
TATGATTGGCTTGATGGATGCCGAAAGTGGCTACTTGGCTGGCCTCGGCGCATTAATGATCAGTTTCGGTGGTGCGTTAT
CATCACTCAATCGGTTTAGTCGTTTGGCCATGGGGCAAAGTTTGTTTGGTTGGTCGATCGATCTGTTTCAATTTTTAACC
CCAGGCTTTGTCTGTTTGGCCTATGGCCTGTGGTATGGCCAACAAGCCCTGCGCCTACGCCGCACAACCCAGATTTGGCT
GGCCCCAATGCTCACAATTTTCGCGATTCAGAGCTTTGCTGCCTTGATGATTGGTCGCCAAAATGGCCCAAGTCAGTTTA
TTGTGCTGTTAAGTTTTACCAGCATCGCCAGTTTTACCATGATTGGTCTGTGTATTCGCCAAGCCCGTTGGCAAGGCTTG
CGCACGGTAATCATCTTTTCGGCAGCCTATCTCACGATGATCAGCAGCATGAATATCATTGCTCATAGTTTTAACGAACA
AAACGACTTAATGATTTCGATGGTGTTGACGACCAATATGTTGGCGGCGCTCTGTTTTGCTGGGGCGGGCTGGATTTTGT
ATCAGAGCACCAAGCGACGGCAGCAGATTCAACGAATTATGGCGATGCTTGATGATAGTTTGGCCCAACCCAAACTAAAT
GGGCGGGCTGGGCCAATTCATTAA

Upstream 100 bases:

>100_bases
GTCAAACAAGATCGTTTTCCCAACCAAATTTGGCGCATTCTACATGATGAATGGGTTTGGGAACCACGTTAGCCAACCCA
AAGGTCGAGAGGCGCTTTTT

Downstream 100 bases:

>100_bases
TTACAATACGCTACGTTCAATAAATTCGCCCATTACGCGATTAAATTCTTGCGGTTTTTCCAAGCTGACCATATGTGCCA
CATCGGGGAAGGCCACATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT
PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL
RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN
GRAGPIH

Sequences:

>Translated_247_residues
MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT
PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL
RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN
GRAGPIH
>Mature_247_residues
MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT
PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL
RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN
GRAGPIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27397; Mature: 27397

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA