| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900915
Identifier: 159900915
GI number: 159900915
Start: 5626104
End: 5626847
Strand: Reverse
Name: 159900915
Synonym: Haur_4402
Alternate gene names: NA
Gene position: 5626847-5626104 (Counterclockwise)
Preceding gene: 159900916
Following gene: 159900913
Centisome position: 88.66
GC content: 48.79
Gene sequence:
>744_bases ATGCAAACAATGTGGATGCTCGCAGCAGGCGATTTGCTGACATTTTCCTTGACTACCGCTGCTCTGTGGTGGCTTACCAG TATGATTGGCTTGATGGATGCCGAAAGTGGCTACTTGGCTGGCCTCGGCGCATTAATGATCAGTTTCGGTGGTGCGTTAT CATCACTCAATCGGTTTAGTCGTTTGGCCATGGGGCAAAGTTTGTTTGGTTGGTCGATCGATCTGTTTCAATTTTTAACC CCAGGCTTTGTCTGTTTGGCCTATGGCCTGTGGTATGGCCAACAAGCCCTGCGCCTACGCCGCACAACCCAGATTTGGCT GGCCCCAATGCTCACAATTTTCGCGATTCAGAGCTTTGCTGCCTTGATGATTGGTCGCCAAAATGGCCCAAGTCAGTTTA TTGTGCTGTTAAGTTTTACCAGCATCGCCAGTTTTACCATGATTGGTCTGTGTATTCGCCAAGCCCGTTGGCAAGGCTTG CGCACGGTAATCATCTTTTCGGCAGCCTATCTCACGATGATCAGCAGCATGAATATCATTGCTCATAGTTTTAACGAACA AAACGACTTAATGATTTCGATGGTGTTGACGACCAATATGTTGGCGGCGCTCTGTTTTGCTGGGGCGGGCTGGATTTTGT ATCAGAGCACCAAGCGACGGCAGCAGATTCAACGAATTATGGCGATGCTTGATGATAGTTTGGCCCAACCCAAACTAAAT GGGCGGGCTGGGCCAATTCATTAA
Upstream 100 bases:
>100_bases GTCAAACAAGATCGTTTTCCCAACCAAATTTGGCGCATTCTACATGATGAATGGGTTTGGGAACCACGTTAGCCAACCCA AAGGTCGAGAGGCGCTTTTT
Downstream 100 bases:
>100_bases TTACAATACGCTACGTTCAATAAATTCGCCCATTACGCGATTAAATTCTTGCGGTTTTTCCAAGCTGACCATATGTGCCA CATCGGGGAAGGCCACATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN GRAGPIH
Sequences:
>Translated_247_residues MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN GRAGPIH >Mature_247_residues MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFSRLAMGQSLFGWSIDLFQFLT PGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFAALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGL RTVIIFSAAYLTMISSMNIIAHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN GRAGPIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27397; Mature: 27397
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFS CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLAMGQSLFGWSIDLFQFLTPGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFA HHHHCCHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGLRTVIIFSAAYLTMISSMNII HHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN HHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC GRAGPIH CCCCCCC >Mature Secondary Structure MQTMWMLAAGDLLTFSLTTAALWWLTSMIGLMDAESGYLAGLGALMISFGGALSSLNRFS CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RLAMGQSLFGWSIDLFQFLTPGFVCLAYGLWYGQQALRLRRTTQIWLAPMLTIFAIQSFA HHHHCCHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMIGRQNGPSQFIVLLSFTSIASFTMIGLCIRQARWQGLRTVIIFSAAYLTMISSMNII HHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHSFNEQNDLMISMVLTTNMLAALCFAGAGWILYQSTKRRQQIQRIMAMLDDSLAQPKLN HHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC GRAGPIH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA