The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900858

Identifier: 159900858

GI number: 159900858

Start: 5552911

End: 5553426

Strand: Reverse

Name: 159900858

Synonym: Haur_4345

Alternate gene names: NA

Gene position: 5553426-5552911 (Counterclockwise)

Preceding gene: 159900859

Following gene: 159900857

Centisome position: 87.5

GC content: 48.64

Gene sequence:

>516_bases
ATGTCGTGGGAAATCGGCTTAGTTACATTTGGGAGTGTTGTTGGGTTGGTGATTGTGCTATGGGTGTTTAGTCGCTTAGC
TTGGGGTGGTGGTATGCGCAATCCATCGTATGAGTTGTTGAATCCAAGCAAAGAACACCCAATTCATACCCATTTTGCCC
AACCCGACCAAGAATCGATCGTTGTTCGTTGTAAACAGTGTCACTTTAGTCATACGCTGCCTGAGATTAGTAAAATGCCA
GCATTTTTAACCTCAGTGGCCCGCTCCAGCAGCGAAAGTGGCGAGCTTAAGTCAATTTGTCCACATTGCGAGGGTGTGCT
CCAAAGCTGGATTCGCCAAGCAATTCAGCATCATGGCAGCCAGCAAACTCTCGATTTTGCAGTATTACGGCGTGGTCAAC
GCCGCTTGTACGAAATTGAAACAACCATCTATGCCTCATTGGGCGAGATTCCCCAACCATACCGCAGTTTGGTGGCGGAA
GCGCTGAATGAGCCAGAGCCAGAGGAAACTGCATGA

Upstream 100 bases:

>100_bases
AGGTGGCACCACGAGAGCTTTGAAGCTCTTCGTCCTTCTCTAGGGACGAAGAGCTTTTTTTAATGTCGAATTTTTACCCA
GCCAACGTTTGAGGTTTGTG

Downstream 100 bases:

>100_bases
TTATTCGAGGCGATCAAGCCGATTTAATTCATAATCACGAGGGTCGTCTAGCACCCAATCAACAACGTCAACTTCAGGCG
ATGCGAGCGTTTCGCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSWEIGLVTFGSVVGLVIVLWVFSRLAWGGGMRNPSYELLNPSKEHPIHTHFAQPDQESIVVRCKQCHFSHTLPEISKMP
AFLTSVARSSSESGELKSICPHCEGVLQSWIRQAIQHHGSQQTLDFAVLRRGQRRLYEIETTIYASLGEIPQPYRSLVAE
ALNEPEPEETA

Sequences:

>Translated_171_residues
MSWEIGLVTFGSVVGLVIVLWVFSRLAWGGGMRNPSYELLNPSKEHPIHTHFAQPDQESIVVRCKQCHFSHTLPEISKMP
AFLTSVARSSSESGELKSICPHCEGVLQSWIRQAIQHHGSQQTLDFAVLRRGQRRLYEIETTIYASLGEIPQPYRSLVAE
ALNEPEPEETA
>Mature_170_residues
SWEIGLVTFGSVVGLVIVLWVFSRLAWGGGMRNPSYELLNPSKEHPIHTHFAQPDQESIVVRCKQCHFSHTLPEISKMPA
FLTSVARSSSESGELKSICPHCEGVLQSWIRQAIQHHGSQQTLDFAVLRRGQRRLYEIETTIYASLGEIPQPYRSLVAEA
LNEPEPEETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19224; Mature: 19093

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWEIGLVTFGSVVGLVIVLWVFSRLAWGGGMRNPSYELLNPSKEHPIHTHFAQPDQESI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH
VVRCKQCHFSHTLPEISKMPAFLTSVARSSSESGELKSICPHCEGVLQSWIRQAIQHHGS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QQTLDFAVLRRGQRRLYEIETTIYASLGEIPQPYRSLVAEALNEPEPEETA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SWEIGLVTFGSVVGLVIVLWVFSRLAWGGGMRNPSYELLNPSKEHPIHTHFAQPDQESI
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH
VVRCKQCHFSHTLPEISKMPAFLTSVARSSSESGELKSICPHCEGVLQSWIRQAIQHHGS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QQTLDFAVLRRGQRRLYEIETTIYASLGEIPQPYRSLVAEALNEPEPEETA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA