Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 159900844

GI number: 159900844

Start: 5529940

End: 5530539

Strand: Reverse

Name: ubiX [C]

Synonym: Haur_4331

Alternate gene names: 159900844

Gene position: 5530539-5529940 (Counterclockwise)

Preceding gene: 159900845

Following gene: 159900843

Centisome position: 87.14

GC content: 56.83

Gene sequence:

>600_bases
ATGAGTAAGCGTTTGCCAGTGGTAGTTGGGGTTAGCGGCGCGAGTGGAGCGGCCCTTGCCGATCGGGTGATCGAGCGCTT
GATCGCTTTGGAACACCCGATTGAGTTGATTGCTACTTCATCAGCTCGGATCGTTTGGCGACAAGAACAAGGCTATCCTT
GGGCTGAGGCCGTGGCGCGTTGGCAGGCTTCAGGCCTGATTACCGAACATAATCCCAATAATCAAGCGGCGACGATTGCT
AGCGGCTCGTATCCTGTCTATGGCATGCTGATTGTGCCCTGCTCGATGGGCACAGTTGCCGCCTTGGCGGCTGGTTTTGC
CAACAATTTGCTGCTGCGGGTGGCCGATGTAACGCAAAAAGAGGGACGGCGCTTGGTCGTCGTCCCGCGTGAAACGCCGC
TATCGAGCGTGCATTTGGAAAATATGCTGCGTTTATCGCAACGCGGCGTGCGACTTGTGCCGCCAATGCCCAATTTCTAC
GCTCGCCCAACCACGGTTGCCGAGGTGGTCGATTTTGTGGCGGCTCGCGCCTTAGTCGCCTTGGGGCTAAGCCCTGAGCT
TGATAGTAACCAGCAATGGGCTGGCTTGGAGCTTGAATAA

Upstream 100 bases:

>100_bases
CTGGTCTATCGCGATGAAGATGGCGTTGATCATATCTACTATGCTGCCCGCCGCGAGGAACTTGAAAACGAATGGCGCGA
ATTATTGGAGCTATGGGACG

Downstream 100 bases:

>100_bases
TGTCAGTTTTGCCACAATCCGATCAGAAGGCGGTCTATGTCAATGCCATGTTCACAGCAATTGCCCAACGCTATGATCTG
ATGAATCGGCTGATGACGTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSKRLPVVVGVSGASGAALADRVIERLIALEHPIELIATSSARIVWRQEQGYPWAEAVARWQASGLITEHNPNNQAATIA
SGSYPVYGMLIVPCSMGTVAALAAGFANNLLLRVADVTQKEGRRLVVVPRETPLSSVHLENMLRLSQRGVRLVPPMPNFY
ARPTTVAEVVDFVAARALVALGLSPELDSNQQWAGLELE

Sequences:

>Translated_199_residues
MSKRLPVVVGVSGASGAALADRVIERLIALEHPIELIATSSARIVWRQEQGYPWAEAVARWQASGLITEHNPNNQAATIA
SGSYPVYGMLIVPCSMGTVAALAAGFANNLLLRVADVTQKEGRRLVVVPRETPLSSVHLENMLRLSQRGVRLVPPMPNFY
ARPTTVAEVVDFVAARALVALGLSPELDSNQQWAGLELE
>Mature_198_residues
SKRLPVVVGVSGASGAALADRVIERLIALEHPIELIATSSARIVWRQEQGYPWAEAVARWQASGLITEHNPNNQAATIAS
GSYPVYGMLIVPCSMGTVAALAAGFANNLLLRVADVTQKEGRRLVVVPRETPLSSVHLENMLRLSQRGVRLVPPMPNFYA
RPTTVAEVVDFVAARALVALGLSPELDSNQQWAGLELE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=194, Percent_Identity=35.0515463917526, Blast_Score=108, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320746, Length=191, Percent_Identity=35.6020942408377, Blast_Score=127, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21443; Mature: 21312

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLPVVVGVSGASGAALADRVIERLIALEHPIELIATSSARIVWRQEQGYPWAEAVAR
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCCHHHHHHH
WQASGLITEHNPNNQAATIASGSYPVYGMLIVPCSMGTVAALAAGFANNLLLRVADVTQK
HHHCCEEEECCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHEEEEEHHHHH
EGRRLVVVPRETPLSSVHLENMLRLSQRGVRLVPPMPNFYARPTTVAEVVDFVAARALVA
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LGLSPELDSNQQWAGLELE
HCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKRLPVVVGVSGASGAALADRVIERLIALEHPIELIATSSARIVWRQEQGYPWAEAVAR
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHEEECCCEEEEEEECCCCCHHHHHHH
WQASGLITEHNPNNQAATIASGSYPVYGMLIVPCSMGTVAALAAGFANNLLLRVADVTQK
HHHCCEEEECCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHEEEEEHHHHH
EGRRLVVVPRETPLSSVHLENMLRLSQRGVRLVPPMPNFYARPTTVAEVVDFVAARALVA
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
LGLSPELDSNQQWAGLELE
HCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]