Click here to switch to the map view.

The map label for this gene is 159900815

Identifier: 159900815

GI number: 159900815

Start: 5492229

End: 5493845

Strand: Reverse

Name: 159900815

Synonym: Haur_4302

Alternate gene names: NA

Gene position: 5493845-5492229 (Counterclockwise)

Preceding gene: 159900816

Following gene: 159900814

Centisome position: 86.56

GC content: 52.63

Gene sequence:

>1617_bases
ATGCACGACCCTTGGGGCGATACATTTACCGCTGACGAGCAGGCGATTCTTGCGCCATTTGTCACTAATCTCGATCAGCC
AATTTTTGGCTTGCGCAACTTACCTGAAGTTGTCAAAGGGGCGCTGTTCTCGCGCTATAGCCGTAGCGACAAAAGCTTGC
GGCGGATGCTGCTCGATGAGTTTATTCAAGCGCCAGAGGCTGGTTTTCAGGCGATTGTTGGCCATGCTGCGGCTAACGGC
AACGATCAACTGGTAGCAACCAAACAGGCCGAGGCTTTTTACGAACGGGTGTTGCTGGGATATGGCGATGATTCGGTGGC
CGAGTTGGGCGGGGCGCACGTTGCCTGCGAAGGCGTGAGCAACATCGTCGCCAAAGCACTCGAAGATAGTCGCTTGGGCC
TCGATCCGCTTGAAAAATCGACCCGTTATGTTCCCTTCGATCGCCAAGTGGCGGGCAAATATCGCTACCATCGGGTGGCT
GAGCTTATGCAATCGCCCCATGCCACGCTCTATGAACAAACGCTTGATCAGTTGTTTGATACCTATCGAGTATTAATTGA
GCCTGTGCAACGCTGGGTGCAAAGCGCCACACCACGCGATGCCAAAACCAGCGAACGGGCCTATGTTAGTGCCACTCGCG
CCAAAGCTCTCGATTTGCTGCGTGGTTTGTTGCCAATGGCGACGTTGACCAACGTTGGTTTGTTTGGCAATGGGCGGGCT
TTTGAATATTTGTTGACCAAATTGGCGAGCTCTGAGCATAGTGAGGTATGCAACGTTGGCGTTAATTTGCAACATGAGCT
TGATCAATTAATTCCTTCGTTTGTGAAACGTGCCAAAACTGAGCGTGGCGCAGCCTATAGCCAATATCTCGCGACCATGC
GCCAAGCAGGAGCCGCCTTCCAGCCCGAAATTCCTACAAGCAACGATCTACAAGCGGTAACCTTGGTAGAATTTGATCCT
GATGCTGAGGCCAAGGTGGTGGCGGCGATTCTTTATCCGCATAGCGACCAACCGTTGGAAACCTTACAATGCTGGGCACG
AAATTTGCCAACTGAAGAGCGCAGCGCAATTATTCGCGCCTATGTTGGCGAACGTGGATCGCGCTTCCATCGCCCAGGCC
GCGCCTTTGAGGAAACCTACTATACCTTTGATTTCTTGGCCGATATTGGGGCATATCGCGATTTGCAACGCCATCGGATT
TTGACCCAAGAACGCCAGCGTTATAGCGTGGTGCATGGCTACGCGGTTGCGCCTGAACTTGAGGCCGCTGGGGTTGCCGC
TGCTTATTGCACGGCACTTGATCAAACGGCAGCAGCAGTTCAAGCGATCGAGGCCGATTTTCCGGCAGCCGCTCAATATT
TGGTGCCGTTTGCCTACCGCATTCGTTGGCGTTTTCGTTTGAATTTACGCGAAGCCTACCATTTGATTGAGCTACGAGCT
GCGCCACAGGGCCATCCCAGCTATCGGGCGATCGCTCAACAAATGTATTTGGCCCTACAAAAAATCCACCCAAGTTTGAT
CGAAGGCATGCAATTTGTCGATTTGGGTGAGCATGCTTTAGAACGTTTGGCGGCTGAACAACGCTTCGACCAAAAATTGG
CCGAGCGTCAACAATAG

Upstream 100 bases:

>100_bases
TGATCTATGCACCCTAGTAGCCATTCCCCAAAATTAACTCTTCTATCTCAGGATAAAATACCCAAGTTTGAAACAAAAAA
TCTATTATTGGAGAACTTCA

Downstream 100 bases:

>100_bases
GAACGAACTATGTGGCGGCGTGAATTCGATGATTTGCTGAATGGAATTGCTGGCGCGTTTTTGTTTGGCATTCCATTGCT
CTATACCATGGAAGTTTGGG

Product: thymidylate synthase complementing protein ThyX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MHDPWGDTFTADEQAILAPFVTNLDQPIFGLRNLPEVVKGALFSRYSRSDKSLRRMLLDEFIQAPEAGFQAIVGHAAANG
NDQLVATKQAEAFYERVLLGYGDDSVAELGGAHVACEGVSNIVAKALEDSRLGLDPLEKSTRYVPFDRQVAGKYRYHRVA
ELMQSPHATLYEQTLDQLFDTYRVLIEPVQRWVQSATPRDAKTSERAYVSATRAKALDLLRGLLPMATLTNVGLFGNGRA
FEYLLTKLASSEHSEVCNVGVNLQHELDQLIPSFVKRAKTERGAAYSQYLATMRQAGAAFQPEIPTSNDLQAVTLVEFDP
DAEAKVVAAILYPHSDQPLETLQCWARNLPTEERSAIIRAYVGERGSRFHRPGRAFEETYYTFDFLADIGAYRDLQRHRI
LTQERQRYSVVHGYAVAPELEAAGVAAAYCTALDQTAAAVQAIEADFPAAAQYLVPFAYRIRWRFRLNLREAYHLIELRA
APQGHPSYRAIAQQMYLALQKIHPSLIEGMQFVDLGEHALERLAAEQRFDQKLAERQQ

Sequences:

>Translated_538_residues
MHDPWGDTFTADEQAILAPFVTNLDQPIFGLRNLPEVVKGALFSRYSRSDKSLRRMLLDEFIQAPEAGFQAIVGHAAANG
NDQLVATKQAEAFYERVLLGYGDDSVAELGGAHVACEGVSNIVAKALEDSRLGLDPLEKSTRYVPFDRQVAGKYRYHRVA
ELMQSPHATLYEQTLDQLFDTYRVLIEPVQRWVQSATPRDAKTSERAYVSATRAKALDLLRGLLPMATLTNVGLFGNGRA
FEYLLTKLASSEHSEVCNVGVNLQHELDQLIPSFVKRAKTERGAAYSQYLATMRQAGAAFQPEIPTSNDLQAVTLVEFDP
DAEAKVVAAILYPHSDQPLETLQCWARNLPTEERSAIIRAYVGERGSRFHRPGRAFEETYYTFDFLADIGAYRDLQRHRI
LTQERQRYSVVHGYAVAPELEAAGVAAAYCTALDQTAAAVQAIEADFPAAAQYLVPFAYRIRWRFRLNLREAYHLIELRA
APQGHPSYRAIAQQMYLALQKIHPSLIEGMQFVDLGEHALERLAAEQRFDQKLAERQQ
>Mature_538_residues
MHDPWGDTFTADEQAILAPFVTNLDQPIFGLRNLPEVVKGALFSRYSRSDKSLRRMLLDEFIQAPEAGFQAIVGHAAANG
NDQLVATKQAEAFYERVLLGYGDDSVAELGGAHVACEGVSNIVAKALEDSRLGLDPLEKSTRYVPFDRQVAGKYRYHRVA
ELMQSPHATLYEQTLDQLFDTYRVLIEPVQRWVQSATPRDAKTSERAYVSATRAKALDLLRGLLPMATLTNVGLFGNGRA
FEYLLTKLASSEHSEVCNVGVNLQHELDQLIPSFVKRAKTERGAAYSQYLATMRQAGAAFQPEIPTSNDLQAVTLVEFDP
DAEAKVVAAILYPHSDQPLETLQCWARNLPTEERSAIIRAYVGERGSRFHRPGRAFEETYYTFDFLADIGAYRDLQRHRI
LTQERQRYSVVHGYAVAPELEAAGVAAAYCTALDQTAAAVQAIEADFPAAAQYLVPFAYRIRWRFRLNLREAYHLIELRA
APQGHPSYRAIAQQMYLALQKIHPSLIEGMQFVDLGEHALERLAAEQRFDQKLAERQQ

Specific function: Unknown

COG id: COG1351

COG function: function code F; Predicted alternative thymidylate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 thyX (flavin-dependent thymidylate synthase) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003669 [H]

Pfam domain/function: PF02511 Thy1 [H]

EC number: NA

Molecular weight: Translated: 60353; Mature: 60353

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDPWGDTFTADEQAILAPFVTNLDQPIFGLRNLPEVVKGALFSRYSRSDKSLRRMLLDE
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
FIQAPEAGFQAIVGHAAANGNDQLVATKQAEAFYERVLLGYGDDSVAELGGAHVACEGVS
HHHCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHHHH
NIVAKALEDSRLGLDPLEKSTRYVPFDRQVAGKYRYHRVAELMQSPHATLYEQTLDQLFD
HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TYRVLIEPVQRWVQSATPRDAKTSERAYVSATRAKALDLLRGLLPMATLTNVGLFGNGRA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FEYLLTKLASSEHSEVCNVGVNLQHELDQLIPSFVKRAKTERGAAYSQYLATMRQAGAAF
HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
QPEIPTSNDLQAVTLVEFDPDAEAKVVAAILYPHSDQPLETLQCWARNLPTEERSAIIRA
CCCCCCCCCCCEEEEEEECCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH
YVGERGSRFHRPGRAFEETYYTFDFLADIGAYRDLQRHRILTQERQRYSVVHGYAVAPEL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCH
EAAGVAAAYCTALDQTAAAVQAIEADFPAAAQYLVPFAYRIRWRFRLNLREAYHLIELRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCC
APQGHPSYRAIAQQMYLALQKIHPSLIEGMQFVDLGEHALERLAAEQRFDQKLAERQQ
CCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHDPWGDTFTADEQAILAPFVTNLDQPIFGLRNLPEVVKGALFSRYSRSDKSLRRMLLDE
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
FIQAPEAGFQAIVGHAAANGNDQLVATKQAEAFYERVLLGYGDDSVAELGGAHVACEGVS
HHHCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHHHH
NIVAKALEDSRLGLDPLEKSTRYVPFDRQVAGKYRYHRVAELMQSPHATLYEQTLDQLFD
HHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TYRVLIEPVQRWVQSATPRDAKTSERAYVSATRAKALDLLRGLLPMATLTNVGLFGNGRA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FEYLLTKLASSEHSEVCNVGVNLQHELDQLIPSFVKRAKTERGAAYSQYLATMRQAGAAF
HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
QPEIPTSNDLQAVTLVEFDPDAEAKVVAAILYPHSDQPLETLQCWARNLPTEERSAIIRA
CCCCCCCCCCCEEEEEEECCCCCHHEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHH
YVGERGSRFHRPGRAFEETYYTFDFLADIGAYRDLQRHRILTQERQRYSVVHGYAVAPEL
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCH
EAAGVAAAYCTALDQTAAAVQAIEADFPAAAQYLVPFAYRIRWRFRLNLREAYHLIELRA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCC
APQGHPSYRAIAQQMYLALQKIHPSLIEGMQFVDLGEHALERLAAEQRFDQKLAERQQ
CCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]