| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900816
Identifier: 159900816
GI number: 159900816
Start: 5494172
End: 5495161
Strand: Reverse
Name: 159900816
Synonym: Haur_4303
Alternate gene names: NA
Gene position: 5495161-5494172 (Counterclockwise)
Preceding gene: 159900817
Following gene: 159900815
Centisome position: 86.58
GC content: 44.04
Gene sequence:
>990_bases ATGCCAGCGAATCGTAGCCCAATTCAGCTTCGCCGCGAAAACCTAGGAATGTACTATGGTGGCAATGATGGAATAGCAAT TCAACGGCTGTTAGTTGAATATGTCGATTTTCTCCTAAAAAGCCAACATGCTCAGCGGATTCAGATAACTATCTTGCCAG AGGCAGGCTTTGTTGTGCAAGATTTTGAGGCGACAATTGAATCCAATAATTTTTGTGGGTTGCCAGAAGATCAACTATTT CACTTGCTTGGTGCTGCTCAATATTGCACGATTGATCTCCATAAAGCTGGGCAACATTATCAATTAAGCTACAGCGGCGA GCCAACTGTTCCAGCATTACAGCTAGTTGGTTCCAGCCAAGCCAGCTGCCGAAGAATCCATTTTGTGCCTAACCACGCTA TTTTTATAAATCGAACTAGCTCAATCCATCAATTCTTAGGTTCGTTGCGCGGCTTGGCAACGCTATTTCGAGGTTGTCGA ATTGAGGTGGTTGACGTTATGCAAGCGACGACCAACCAGCTTTTTTACCCCAATGGCTTGCGTGATTATCTTGATGGGTT AATCTATCATGATCTGAATCCACAGCGATATTTAGAGTTTGAAGGCGCTAATGAGCATGTTCAAATCAAGCTTGGCCTGC GATTTGGCTATTTCAGTCGGATCGAGCAATGTTTACTGCGTTATAAGCATGTGCCGTTTGAGCCAAGTTATCGACGTGGG ATACTCAAGGGTTTGGCCTCAGGATTAACAACTTATGCTCAAGCTCATGGCCAAATTACTGCCAGCCAAATAATCGAGCC AGCCCAAATTCGCGATTTTGGTTGTTTACTCGTTTTAGATCATGTACCTAAAACGCTCCAAGATGCAGGCGGGCGGCCCA GCGATCAGCTATTAATTGAAACGACAATTCAACAAATAATCCAGCAGCAACTCCCTGAGAAACTTGCAACATTATCCGAT GCTGAAATTTATACATTGGTTATGTGGTAG
Upstream 100 bases:
>100_bases GGGACGGAAGGGTGGCGAGACTCCTGATTCAAACCCATAAATGCTGAGAAAAGGTTTACGAATGGCCGATAATTCTCTTT ATGCTGCTAGCAGGATTCAA
Downstream 100 bases:
>100_bases GTTTCTGATCCATGAAGATTTTTAGCCACGAATTGCACGAATGCTTGCTTTCATTAGCACAATAGGATGGATACTTCACC ATAATAGTCCACCAACCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLF HLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCR IEVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSD AEIYTLVMW
Sequences:
>Translated_329_residues MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLF HLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCR IEVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSD AEIYTLVMW >Mature_328_residues PANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQDFEATIESNNFCGLPEDQLFH LLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRI EVVDVMQATTNQLFYPNGLRDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRGI LKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIETTIQQIIQQQLPEKLATLSDA EIYTLVMW
Specific function: Unknown
COG id: COG0187
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37174; Mature: 37043
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQ CCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE DFEATIESNNFCGLPEDQLFHLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQ HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC ASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRIEVVDVMQATTNQLFYPNGL CCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCH RDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG HHHHHHHEECCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIE HHHHHHHHHHHHHHHCCCEEHHHCCCCHHHCCCCEEEEEHHCCHHHHHCCCCCCCHHHHH TTIQQIIQQQLPEKLATLSDAEIYTLVMW HHHHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure PANRSPIQLRRENLGMYYGGNDGIAIQRLLVEYVDFLLKSQHAQRIQITILPEAGFVVQ CCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEE DFEATIESNNFCGLPEDQLFHLLGAAQYCTIDLHKAGQHYQLSYSGEPTVPALQLVGSSQ HHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHCCCC ASCRRIHFVPNHAIFINRTSSIHQFLGSLRGLATLFRGCRIEVVDVMQATTNQLFYPNGL CCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCH RDYLDGLIYHDLNPQRYLEFEGANEHVQIKLGLRFGYFSRIEQCLLRYKHVPFEPSYRRG HHHHHHHEECCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHH ILKGLASGLTTYAQAHGQITASQIIEPAQIRDFGCLLVLDHVPKTLQDAGGRPSDQLLIE HHHHHHHHHHHHHHHCCCEEHHHCCCCHHHCCCCEEEEEHHCCHHHHHCCCCCCCHHHHH TTIQQIIQQQLPEKLATLSDAEIYTLVMW HHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA