| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900809
Identifier: 159900809
GI number: 159900809
Start: 5485030
End: 5486958
Strand: Direct
Name: 159900809
Synonym: Haur_4296
Alternate gene names: NA
Gene position: 5485030-5486958 (Clockwise)
Preceding gene: 159900808
Following gene: 159900819
Centisome position: 86.42
GC content: 50.23
Gene sequence:
>1929_bases ATGATGAAACGTTGGATGTTATTCGTGCTGATGGTTGCAAGTTTGGGCTTGCCGCAAGCCAGCAGGGCCGCCGAACAACA ATGTTTCGAGCAAACGGGCTTTTGTATCGAAGGCCGCTTCGCCGAATATTGGCAGCAAAATGGCGGCTTGCAGGTCTTTG GCTATCCACTGAGCAGCGCCCAAGATGGCTATAATCACGATAGTCAAAAAGCCTTTTTAACTCAGCAATTTGAGCGTGCT CGCTTTGAATTGCACCCTGAGTTTGCTGCACCCTACGATGTGCTACTTGGTCGTTTGGGCGATGATCTGCTGCGCTATCG CAATATTGATAGTCCAATGTTGCCACGCGAGGCTGGCGCAACATCAGGCTGTTTGTGGTTTGAAACAACTGGACACAACG TCTGTAACCAAGCCAATGGCCTCGGTTTTATGAGCTATTGGCAAAACCATGGCCTCAACGATCCCAAACTTGATGCCTTT GGCCGTTCATTGCAATTATTTGGCTACCCGCTGACTGAGCCAGCCATAGAAACCAACGCCAATGGTGATCGCGTGCTCAC CCAATATTTCGAACGTGCCCGTTTCGAGTGGCATCCAACCCAGCCCGATCAATTTAAAGTGCTGCTAGGTTTAGTCGGCA AAGAATCGCTACAATTGCCCTATGGCGCAAGTGCTGAACCATTAGAATTGACCTTGGTTGGCGATACGCTCTTTTTCACC GCCGACGATGGCGTGCATGGCCGCGAATTATGGACAAGCGACGGCACCGAAGCTGGCACACGCTTAGTCAAGGATCTGAA AGTTGGCGCTGAATCAAATTGGCCATATCAACTAGCAGCAGCCAAGTACGGTGTCTTTTTCTTGCAATTGAACGAGACGG CCTATGAATTGTGGTTTAGCGATGGTAGCGCAGCGAATACCCGAATGGTTAAGTCAATTCAAGCTAATTCCAACCCATAT ATAACCAACTTGATCGCTTTAGGTGATGGCGTGCTCTTTTTCGCCAACGATGGGCTGAGTGGCCTTGAGCCATGGTATAG CGATGGCACCGCGGCTGGCACTCGTTTGCTCCGCGACATTAATCCAGGTGCAGGCCACTCAAATGTTGAAACTGGCTATA GCTATTTTTGGACAGAATATACGCCCATGGCGGGCGGAATGGCCTTCTTGGCGAGAAACGCTCAGGCGGGTGCACAAGTT TGGTGGACTGATGGAACTGAGGCAGGCACACGCCAAATCAGCAATTTTGCTGGTGAAATCCATAGTGTGTTTGAGTTAGA GCCTTTGGATGCCCAGCATTTGATCGTGGCAGCCAGCAATGAAGGCACATTCGGCATCTGGAAACTGAACATGAGCACTG GCGAGCAACAAAACTTGGCTACTTACCCGTGGATTACCGGCAGTATTCGTAATCCAATTCCGGCTTCGCAACTCACTCAG GTTAACGGCGAGGTATTTTATACGGTGATAAGCCAAGGCGTTGGCACAAGCCTCTGGCGCACCAATGGTCAAAAAGCCCA AGTAGTTGATTTAGCTGGCAAGAGTCCTTATCGCCTGCTAAGCGCCAATAATACATTCTATCTCCAGCTTTACCAAGGCA CTGAACAGGCTGGCTGGTGGATACTGAATGCAGATGCCAGTTTGCGCCAATTCAGCTCACTCGACCTCATGCTTGCGGAT ACTGGCCAAGGCTTGATTGGCTGGGAATTGCTCAGCAATCGGGTGCGGGTTTACCGCAGCACCGCCGATTATCAAGCGAT GCACTATCAAGGCTCAGTCTTGAGTCAATCCAGCTTTACCTTCTATCCATCAGATACGGCCAGTAATTCCCAACGCAGCT TTTTTAGCTTACCTGATCAGCAGCATGGCACTGAGCTTTGGGTCAGCGATGCTCAAGGCCTGCGCTTAGTCAAGGATATT CGGCCATAA
Upstream 100 bases:
>100_bases GTTCAGCTTATAAGTAGATTCAAAGTCGTTTACCAGCCAAGTTTCATCGTGATTCGTCAGCCAGTTCTCTATACTCAATC CATATTGATATGGAGGAATA
Downstream 100 bases:
>100_bases CTCAAAGCTGTGGCGCAGTATTCCCGATTGCGCCACAGCTTTATGCTTCAGCTCAAATCGCCAATTGAGCTTTGAGTTGA CTCCATAACTCAAATACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MMKRWMLFVLMVASLGLPQASRAAEQQCFEQTGFCIEGRFAEYWQQNGGLQVFGYPLSSAQDGYNHDSQKAFLTQQFERA RFELHPEFAAPYDVLLGRLGDDLLRYRNIDSPMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAF GRSLQLFGYPLTEPAIETNANGDRVLTQYFERARFEWHPTQPDQFKVLLGLVGKESLQLPYGASAEPLELTLVGDTLFFT ADDGVHGRELWTSDGTEAGTRLVKDLKVGAESNWPYQLAAAKYGVFFLQLNETAYELWFSDGSAANTRMVKSIQANSNPY ITNLIALGDGVLFFANDGLSGLEPWYSDGTAAGTRLLRDINPGAGHSNVETGYSYFWTEYTPMAGGMAFLARNAQAGAQV WWTDGTEAGTRQISNFAGEIHSVFELEPLDAQHLIVAASNEGTFGIWKLNMSTGEQQNLATYPWITGSIRNPIPASQLTQ VNGEVFYTVISQGVGTSLWRTNGQKAQVVDLAGKSPYRLLSANNTFYLQLYQGTEQAGWWILNADASLRQFSSLDLMLAD TGQGLIGWELLSNRVRVYRSTADYQAMHYQGSVLSQSSFTFYPSDTASNSQRSFFSLPDQQHGTELWVSDAQGLRLVKDI RP
Sequences:
>Translated_642_residues MMKRWMLFVLMVASLGLPQASRAAEQQCFEQTGFCIEGRFAEYWQQNGGLQVFGYPLSSAQDGYNHDSQKAFLTQQFERA RFELHPEFAAPYDVLLGRLGDDLLRYRNIDSPMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAF GRSLQLFGYPLTEPAIETNANGDRVLTQYFERARFEWHPTQPDQFKVLLGLVGKESLQLPYGASAEPLELTLVGDTLFFT ADDGVHGRELWTSDGTEAGTRLVKDLKVGAESNWPYQLAAAKYGVFFLQLNETAYELWFSDGSAANTRMVKSIQANSNPY ITNLIALGDGVLFFANDGLSGLEPWYSDGTAAGTRLLRDINPGAGHSNVETGYSYFWTEYTPMAGGMAFLARNAQAGAQV WWTDGTEAGTRQISNFAGEIHSVFELEPLDAQHLIVAASNEGTFGIWKLNMSTGEQQNLATYPWITGSIRNPIPASQLTQ VNGEVFYTVISQGVGTSLWRTNGQKAQVVDLAGKSPYRLLSANNTFYLQLYQGTEQAGWWILNADASLRQFSSLDLMLAD TGQGLIGWELLSNRVRVYRSTADYQAMHYQGSVLSQSSFTFYPSDTASNSQRSFFSLPDQQHGTELWVSDAQGLRLVKDI RP >Mature_642_residues MMKRWMLFVLMVASLGLPQASRAAEQQCFEQTGFCIEGRFAEYWQQNGGLQVFGYPLSSAQDGYNHDSQKAFLTQQFERA RFELHPEFAAPYDVLLGRLGDDLLRYRNIDSPMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAF GRSLQLFGYPLTEPAIETNANGDRVLTQYFERARFEWHPTQPDQFKVLLGLVGKESLQLPYGASAEPLELTLVGDTLFFT ADDGVHGRELWTSDGTEAGTRLVKDLKVGAESNWPYQLAAAKYGVFFLQLNETAYELWFSDGSAANTRMVKSIQANSNPY ITNLIALGDGVLFFANDGLSGLEPWYSDGTAAGTRLLRDINPGAGHSNVETGYSYFWTEYTPMAGGMAFLARNAQAGAQV WWTDGTEAGTRQISNFAGEIHSVFELEPLDAQHLIVAASNEGTFGIWKLNMSTGEQQNLATYPWITGSIRNPIPASQLTQ VNGEVFYTVISQGVGTSLWRTNGQKAQVVDLAGKSPYRLLSANNTFYLQLYQGTEQAGWWILNADASLRQFSSLDLMLAD TGQGLIGWELLSNRVRVYRSTADYQAMHYQGSVLSQSSFTFYPSDTASNSQRSFFSLPDQQHGTELWVSDAQGLRLVKDI RP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71368; Mature: 71368
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRWMLFVLMVASLGLPQASRAAEQQCFEQTGFCIEGRFAEYWQQNGGLQVFGYPLSSA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHCCCCEEEEEECCCCC QDGYNHDSQKAFLTQQFERARFELHPEFAAPYDVLLGRLGDDLLRYRNIDSPMLPREAGA CCCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCC TSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFGRSLQLFGYPLTEPAIETNA CCCEEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCCCCCC NGDRVLTQYFERARFEWHPTQPDQFKVLLGLVGKESLQLPYGASAEPLELTLVGDTLFFT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECEEEEE ADDGVHGRELWTSDGTEAGTRLVKDLKVGAESNWPYQLAAAKYGVFFLQLNETAYELWFS ECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCEEEEEEEC DGSAANTRMVKSIQANSNPYITNLIALGDGVLFFANDGLSGLEPWYSDGTAAGTRLLRDI CCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHC NPGAGHSNVETGYSYFWTEYTPMAGGMAFLARNAQAGAQVWWTDGTEAGTRQISNFAGEI CCCCCCCCCCCCCEEEEEECCCCCCCHHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHH HSVFELEPLDAQHLIVAASNEGTFGIWKLNMSTGEQQNLATYPWITGSIRNPIPASQLTQ HHHEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCEEECCCCCCCCHHHHHH VNGEVFYTVISQGVGTSLWRTNGQKAQVVDLAGKSPYRLLSANNTFYLQLYQGTEQAGWW CCCEEEEEEHHCCCCCHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEEEECCCCCCEE ILNADASLRQFSSLDLMLADTGQGLIGWELLSNRVRVYRSTADYQAMHYQGSVLSQSSFT EEECCCHHHHHCCCEEEEECCCCCEEHHHHHHCCCEEEECCCCCEEEEECCCEECCCCEE FYPSDTASNSQRSFFSLPDQQHGTELWVSDAQGLRLVKDIRP ECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCHHHHCCC >Mature Secondary Structure MMKRWMLFVLMVASLGLPQASRAAEQQCFEQTGFCIEGRFAEYWQQNGGLQVFGYPLSSA CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHCCCCEEEEEECCCCC QDGYNHDSQKAFLTQQFERARFELHPEFAAPYDVLLGRLGDDLLRYRNIDSPMLPREAGA CCCCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCC TSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFGRSLQLFGYPLTEPAIETNA CCCEEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCCCCCCC NGDRVLTQYFERARFEWHPTQPDQFKVLLGLVGKESLQLPYGASAEPLELTLVGDTLFFT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECEEEEE ADDGVHGRELWTSDGTEAGTRLVKDLKVGAESNWPYQLAAAKYGVFFLQLNETAYELWFS ECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEECCEEEEEEEC DGSAANTRMVKSIQANSNPYITNLIALGDGVLFFANDGLSGLEPWYSDGTAAGTRLLRDI CCCCCCHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHC NPGAGHSNVETGYSYFWTEYTPMAGGMAFLARNAQAGAQVWWTDGTEAGTRQISNFAGEI CCCCCCCCCCCCCEEEEEECCCCCCCHHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHH HSVFELEPLDAQHLIVAASNEGTFGIWKLNMSTGEQQNLATYPWITGSIRNPIPASQLTQ HHHEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCEECCEEECCCCCCCCHHHHHH VNGEVFYTVISQGVGTSLWRTNGQKAQVVDLAGKSPYRLLSANNTFYLQLYQGTEQAGWW CCCEEEEEEHHCCCCCHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEEEEECCCCCCEE ILNADASLRQFSSLDLMLADTGQGLIGWELLSNRVRVYRSTADYQAMHYQGSVLSQSSFT EEECCCHHHHHCCCEEEEECCCCCEEHHHHHHCCCEEEECCCCCEEEEECCCEECCCCEE FYPSDTASNSQRSFFSLPDQQHGTELWVSDAQGLRLVKDIRP ECCCCCCCCCCCCEECCCCCCCCCEEEECCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA