Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900808

Identifier: 159900808

GI number: 159900808

Start: 5482942

End: 5484849

Strand: Direct

Name: 159900808

Synonym: Haur_4295

Alternate gene names: NA

Gene position: 5482942-5484849 (Clockwise)

Preceding gene: 159900807

Following gene: 159900809

Centisome position: 86.39

GC content: 47.17

Gene sequence:

>1908_bases
ATGAAACGTTGGATTGTGTTGGCAATTTTCGTCGTCGGTTTAGGGCTTCCCCAAGCCACACAAGCTACCGAATTGCAATG
TTTTGAGCAAACAGGCTTTTGTACCGATGGTCGTTTTTTAGAGTATTGGCGGCAAAATGGTGGCTTAGAAGTCTTCGGTT
ATCCGTTGAGCACAATTGACATCGTTTACAATCAGGATAGCCAGATGCATTTCCTGACTCAGCAATTTGAGCGTGCTCGC
TTTGAGTTTCACCCTGAATTTGCCGCGCCCTACGATATGTTGCTTGGGCGGTTGGGCGATGATCTGTTGCGCTATCGTAA
TATCGATAGTGCCATGTTGCCACGTGAGGCTGGCGCAACATCAGGCTGTTTGTGGTTTGAAACAACTGGACACAACGTCT
GTAACCAAGCCAATGGCCTCGGTTTTATGAGCTATTGGCAAAACCATGGCCTCAACGATCCCAAACTTGATGCCTTTGGC
CGTTCATTGCAATTATTTGGCTACCCGCTGACTGAGCCAGCCATAGAAACCAATGCGAATGGCGATAGTGTACTCACCCA
ACATTTCGAACGCGCCCGTTTCGAGTGGCATCCCAACCAACCTGATCAATTCAAAGTGCTGCTTGGCTTAGTCGGCAAAG
AATCGCAAAAATTAGTCTATGGCGCAAGTGCCGATCCATCAAAATTGACCTTGGTTGGCGATACGCTCTTTTTCACCGCC
GACGATGGCGTGCATGGCCGTGAATTATGGACAAGCGACGGCACCGAGGTTGGCACACGCTTGGTCAAAGATCTGAGCGT
TGGCACTGAGTGGGGTGGAATTTATGAATTAGCCGCTGTCAATCAGGGCGTTATTTTTGCCGTCAACAAGCAGGATAAGG
ACTATCAATTATGGTATAGCGATGGCATTGAAGCTGGCACACGCTTAATCAAAAGCTTTGTTCCAAACGCTAAGATCAAC
AATCTCAAATCATTAGGCAACGGGATCATCTTTTGGGCAAATGATGCAGTTCATGGGATTGAACCATGGTATAGCAACGG
CACTGAAGCTGGTACATATTTGCTGAGTGATATCAACCCAGGCCTTGCAGATTCAGCAGTTTCCAACAATTATGGATCTT
ATTGGGTTGACTATGCCCCCATCGCGGGAGGTATGGCCTTTTTTGCCCAAAATAACCAAATTGGCAATCAAATCTGGTGG
ACAGATGGCAGCATTGCCAACACTCGCCAAATCAGCAATTTAGCAATCTCATTTGGTATGCTTGAGCTAGAAGTGTTAGA
TCAGCAACATTTGATCGCAACAGCCTATCAAAATACAACGATGGGGGTTTGGAATATAACGCTTGCTACTGGCGAACAGC
AACTATTAGCCAGCTATCCTGCAATTGCCACAACCCGTAATCCAGCATCAGCTATACAACTAACCCAAGCTGGTGGAAAG
GTCTATTACCTTAGCAAAACCCAAGCAGGCGAGCTTAGCCTATGGCAAACTAATGGCCAAGCCGATCAAACCATCCAACC
CAATCTGCAAGGCTACAACGCCGAACATATCGTAGCTGCAAACGATCAATTGTATATGCGACTGACTAATCCTCAAGGCA
TTCAGGCTGGCTGGTGGTATTTCGATTCAAGCCAAGGGTTGACTCAACTAACGCCATTACCACTGCATATCCATGCCGCG
AACAATCGCCTATTGGGATGGGAATCGATCGCTGGAGGATTACGGTTCTATAGCACTAATGGGCCAAATCAAGCCCTACG
CTATCGTAGCTCAGTTATGGGCAAGCAGACATACTTCCCTGATACGACCAATGATCGATTTTTCGCCATCCCTAGTTTTC
AGTATGGCACGGAGCTATGGTCTAACGATGGCAGCACCCTGCGGATGGTCAAAGATATTCAGCCATAA

Upstream 100 bases:

>100_bases
AGCTTATAAGCAGATTCGCAGTCGTTTGCCAGCCAAGTTTCATCGTGTTCAGCTAGCTATGTTTCTATACTCAACGCATC
GTTGTAGTGGAGGAATGACC

Downstream 100 bases:

>100_bases
ATGCTTCGCCCAATAAACTTCAACACTCCACTTGTAGCTACAGGTGGAGTTGTTTTATACTCAGCAGCTTTTCAGTTTGA
GTTCAGCTTATAAGTAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MKRWIVLAIFVVGLGLPQATQATELQCFEQTGFCTDGRFLEYWRQNGGLEVFGYPLSTIDIVYNQDSQMHFLTQQFERAR
FEFHPEFAAPYDMLLGRLGDDLLRYRNIDSAMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFG
RSLQLFGYPLTEPAIETNANGDSVLTQHFERARFEWHPNQPDQFKVLLGLVGKESQKLVYGASADPSKLTLVGDTLFFTA
DDGVHGRELWTSDGTEVGTRLVKDLSVGTEWGGIYELAAVNQGVIFAVNKQDKDYQLWYSDGIEAGTRLIKSFVPNAKIN
NLKSLGNGIIFWANDAVHGIEPWYSNGTEAGTYLLSDINPGLADSAVSNNYGSYWVDYAPIAGGMAFFAQNNQIGNQIWW
TDGSIANTRQISNLAISFGMLELEVLDQQHLIATAYQNTTMGVWNITLATGEQQLLASYPAIATTRNPASAIQLTQAGGK
VYYLSKTQAGELSLWQTNGQADQTIQPNLQGYNAEHIVAANDQLYMRLTNPQGIQAGWWYFDSSQGLTQLTPLPLHIHAA
NNRLLGWESIAGGLRFYSTNGPNQALRYRSSVMGKQTYFPDTTNDRFFAIPSFQYGTELWSNDGSTLRMVKDIQP

Sequences:

>Translated_635_residues
MKRWIVLAIFVVGLGLPQATQATELQCFEQTGFCTDGRFLEYWRQNGGLEVFGYPLSTIDIVYNQDSQMHFLTQQFERAR
FEFHPEFAAPYDMLLGRLGDDLLRYRNIDSAMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFG
RSLQLFGYPLTEPAIETNANGDSVLTQHFERARFEWHPNQPDQFKVLLGLVGKESQKLVYGASADPSKLTLVGDTLFFTA
DDGVHGRELWTSDGTEVGTRLVKDLSVGTEWGGIYELAAVNQGVIFAVNKQDKDYQLWYSDGIEAGTRLIKSFVPNAKIN
NLKSLGNGIIFWANDAVHGIEPWYSNGTEAGTYLLSDINPGLADSAVSNNYGSYWVDYAPIAGGMAFFAQNNQIGNQIWW
TDGSIANTRQISNLAISFGMLELEVLDQQHLIATAYQNTTMGVWNITLATGEQQLLASYPAIATTRNPASAIQLTQAGGK
VYYLSKTQAGELSLWQTNGQADQTIQPNLQGYNAEHIVAANDQLYMRLTNPQGIQAGWWYFDSSQGLTQLTPLPLHIHAA
NNRLLGWESIAGGLRFYSTNGPNQALRYRSSVMGKQTYFPDTTNDRFFAIPSFQYGTELWSNDGSTLRMVKDIQP
>Mature_635_residues
MKRWIVLAIFVVGLGLPQATQATELQCFEQTGFCTDGRFLEYWRQNGGLEVFGYPLSTIDIVYNQDSQMHFLTQQFERAR
FEFHPEFAAPYDMLLGRLGDDLLRYRNIDSAMLPREAGATSGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFG
RSLQLFGYPLTEPAIETNANGDSVLTQHFERARFEWHPNQPDQFKVLLGLVGKESQKLVYGASADPSKLTLVGDTLFFTA
DDGVHGRELWTSDGTEVGTRLVKDLSVGTEWGGIYELAAVNQGVIFAVNKQDKDYQLWYSDGIEAGTRLIKSFVPNAKIN
NLKSLGNGIIFWANDAVHGIEPWYSNGTEAGTYLLSDINPGLADSAVSNNYGSYWVDYAPIAGGMAFFAQNNQIGNQIWW
TDGSIANTRQISNLAISFGMLELEVLDQQHLIATAYQNTTMGVWNITLATGEQQLLASYPAIATTRNPASAIQLTQAGGK
VYYLSKTQAGELSLWQTNGQADQTIQPNLQGYNAEHIVAANDQLYMRLTNPQGIQAGWWYFDSSQGLTQLTPLPLHIHAA
NNRLLGWESIAGGLRFYSTNGPNQALRYRSSVMGKQTYFPDTTNDRFFAIPSFQYGTELWSNDGSTLRMVKDIQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70694; Mature: 70694

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWIVLAIFVVGLGLPQATQATELQCFEQTGFCTDGRFLEYWRQNGGLEVFGYPLSTID
CCCCEEEEHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCEEEE
IVYNQDSQMHFLTQQFERARFEFHPEFAAPYDMLLGRLGDDLLRYRNIDSAMLPREAGAT
EEECCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCHHHHHHCCCCHHHCCCCCCCC
SGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFGRSLQLFGYPLTEPAIETNAN
CCEEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCC
GDSVLTQHFERARFEWHPNQPDQFKVLLGLVGKESQKLVYGASADPSKLTLVGDTLFFTA
CCHHHHHHHHHCCEEECCCCCHHHEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEEEEE
DDGVHGRELWTSDGTEVGTRLVKDLSVGTEWGGIYELAAVNQGVIFAVNKQDKDYQLWYS
CCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEC
DGIEAGTRLIKSFVPNAKINNLKSLGNGIIFWANDAVHGIEPWYSNGTEAGTYLLSDINP
CCHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
GLADSAVSNNYGSYWVDYAPIAGGMAFFAQNNQIGNQIWWTDGSIANTRQISNLAISFGM
CCCCHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHEEEEECE
LELEVLDQQHLIATAYQNTTMGVWNITLATGEQQLLASYPAIATTRNPASAIQLTQAGGK
EEEEECCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCCCEEECCCCHHHEEEEECCCE
VYYLSKTQAGELSLWQTNGQADQTIQPNLQGYNAEHIVAANDQLYMRLTNPQGIQAGWWY
EEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCCEEEEEE
FDSSQGLTQLTPLPLHIHAANNRLLGWESIAGGLRFYSTNGPNQALRYRSSVMGKQTYFP
EECCCCCCEECCCEEEEECCCCCEEEHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
DTTNDRFFAIPSFQYGTELWSNDGSTLRMVKDIQP
CCCCCEEEEECCCHHCHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure
MKRWIVLAIFVVGLGLPQATQATELQCFEQTGFCTDGRFLEYWRQNGGLEVFGYPLSTID
CCCCEEEEHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCEEEE
IVYNQDSQMHFLTQQFERARFEFHPEFAAPYDMLLGRLGDDLLRYRNIDSAMLPREAGAT
EEECCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCHHHHHHCCCCHHHCCCCCCCC
SGCLWFETTGHNVCNQANGLGFMSYWQNHGLNDPKLDAFGRSLQLFGYPLTEPAIETNAN
CCEEEEECCCCHHHHCCCCCCHHHHHHHCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCC
GDSVLTQHFERARFEWHPNQPDQFKVLLGLVGKESQKLVYGASADPSKLTLVGDTLFFTA
CCHHHHHHHHHCCEEECCCCCHHHEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEEEEE
DDGVHGRELWTSDGTEVGTRLVKDLSVGTEWGGIYELAAVNQGVIFAVNKQDKDYQLWYS
CCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEEC
DGIEAGTRLIKSFVPNAKINNLKSLGNGIIFWANDAVHGIEPWYSNGTEAGTYLLSDINP
CCHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC
GLADSAVSNNYGSYWVDYAPIAGGMAFFAQNNQIGNQIWWTDGSIANTRQISNLAISFGM
CCCCHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHEEEEECE
LELEVLDQQHLIATAYQNTTMGVWNITLATGEQQLLASYPAIATTRNPASAIQLTQAGGK
EEEEECCCCCEEEEEECCCEEEEEEEEEECCCHHHHHCCCCEEECCCCHHHEEEEECCCE
VYYLSKTQAGELSLWQTNGQADQTIQPNLQGYNAEHIVAANDQLYMRLTNPQGIQAGWWY
EEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCCCCEEEEEE
FDSSQGLTQLTPLPLHIHAANNRLLGWESIAGGLRFYSTNGPNQALRYRSSVMGKQTYFP
EECCCCCCEECCCEEEEECCCCCEEEHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC
DTTNDRFFAIPSFQYGTELWSNDGSTLRMVKDIQP
CCCCCEEEEECCCHHCHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA