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The map label for this gene is yhbH [C]

Identifier: 159900805

GI number: 159900805

Start: 5479507

End: 5480067

Strand: Direct

Name: yhbH [C]

Synonym: Haur_4292

Alternate gene names: 159900805

Gene position: 5479507-5480067 (Clockwise)

Preceding gene: 159900804

Following gene: 159900806

Centisome position: 86.34

GC content: 47.95

Gene sequence:

>561_bases
GTGGAATGGAACATCAAGAGCCGTAATATTAAGCTACACGATGCGCAAAAAGCATTTATTCAAGAAAAATTAGGCAAATT
AGAACGCTACCTCGACGGAATTAACGATTGGAAAGTGGAATGCCGTTTTGAAACACTCCGTGGTAGCGGCGAAACATATA
CTGTTCAAGCAACGCTGTTGGCCGATCATGGGATCATTCTACGGGCAGAAGAACGCGATCGTGAATTGTATGCTGCGGTT
GAGGCAGTTCACGATAATTTGCAACGCCAAATTCGCCGCTTCAAGGAAAAACATTATCGCCGTGGCAAATTGCGCCGCAC
TGCTGGCGAAATTATTGCCGCTCCGCTGCCAGCCTTGCCCGAAGATGCCGAACAAGCCGAAGAACGCCAAATTATTCGCG
CCAAGGAGGTAACTCTGCGGCCTATGTTTAGCGATGAAGCGATCGAACAAATGGAGTTGCTCGGCCACTCGTTCTTTGTG
TTCCGCGATGCTGAAACCGAAAAAATTCAAGTCGTCTATCGCCGTAACGATGGCAATTATGGCTTGATTATGCCCCGCTA
A

Upstream 100 bases:

>100_bases
CCAATTGAATAACGTTCCACTAGGAGCAGCCTATTGCCAGCTTCTTACCTTGCTTGGGTAGGAAGCTGGCGTGTTTTAGG
TTTTTGTAAGGAGGCGTACC

Downstream 100 bases:

>100_bases
GCCTCCTTCTTTTCAACAGGGATCACATGGATGTGTGATCCCTGTTGTGCTTTAATCGGGCATAATAACCTTATTCTTAA
TTGGTTGTTTGCGGGAGTGT

Product: sigma 54 modulation protein/30S ribosomal protein S30EA

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MEWNIKSRNIKLHDAQKAFIQEKLGKLERYLDGINDWKVECRFETLRGSGETYTVQATLLADHGIILRAEERDRELYAAV
EAVHDNLQRQIRRFKEKHYRRGKLRRTAGEIIAAPLPALPEDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFV
FRDAETEKIQVVYRRNDGNYGLIMPR

Sequences:

>Translated_186_residues
MEWNIKSRNIKLHDAQKAFIQEKLGKLERYLDGINDWKVECRFETLRGSGETYTVQATLLADHGIILRAEERDRELYAAV
EAVHDNLQRQIRRFKEKHYRRGKLRRTAGEIIAAPLPALPEDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFV
FRDAETEKIQVVYRRNDGNYGLIMPR
>Mature_186_residues
MEWNIKSRNIKLHDAQKAFIQEKLGKLERYLDGINDWKVECRFETLRGSGETYTVQATLLADHGIILRAEERDRELYAAV
EAVHDNLQRQIRRFKEKHYRRGKLRRTAGEIIAAPLPALPEDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFV
FRDAETEKIQVVYRRNDGNYGLIMPR

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21854; Mature: 21854

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWNIKSRNIKLHDAQKAFIQEKLGKLERYLDGINDWKVECRFETLRGSGETYTVQATLL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEE
ADHGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEKHYRRGKLRRTAGEIIAAPLPALP
ECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKIQVVYRRNDGNY
CCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCE
GLIMPR
EEEECC
>Mature Secondary Structure
MEWNIKSRNIKLHDAQKAFIQEKLGKLERYLDGINDWKVECRFETLRGSGETYTVQATLL
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEEEEE
ADHGIILRAEERDRELYAAVEAVHDNLQRQIRRFKEKHYRRGKLRRTAGEIIAAPLPALP
ECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EDAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKIQVVYRRNDGNY
CCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCE
GLIMPR
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7557338 [H]