| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900806
Identifier: 159900806
GI number: 159900806
Start: 5480171
End: 5480680
Strand: Direct
Name: 159900806
Synonym: Haur_4293
Alternate gene names: NA
Gene position: 5480171-5480680 (Clockwise)
Preceding gene: 159900805
Following gene: 159900807
Centisome position: 86.35
GC content: 52.75
Gene sequence:
>510_bases ATGATTCTCTATTTTGTGCGCCATGGAATTGCTGAAGATTGGGCCGAAAGTGGCCTTGATCAGGATCGGCGCTTGACTGA GCGTGGGCGTAAGCGGATTCGCCAATGTGCTCAGGCGCTGCGCTTGTTGGAAATTAAGCCCCAGATTATTTTGAGCAGCC CTTACCCACGCGCTGCCGAAACCGCCTTGATTATTGCCGAAGCGCTTGGCACTGACCCACCAGTGCTTAAAGAGCAATTA CAACCTGACGGAGCCAATAGCCATTTGCTCACCGAATGCCTCAACCCCGATTGGAATGAAGTGATGATCGTCGGCCACCA GCCAAATCTCAGTGAGTATGTGGCGCATCTAGCGGGCTATGGCACCAATCTGATTTTCAAAAAAGGCACAGTTTGTCGGG TTGAATTACAAGGCGAACATGGTCAAGTCAGCTGGCTGTTGCCGCCAAAAGTGCTGATTGCGCTCGCCGAGGCGCGGCAA GCCAAACCCGCCAAACCTGCGAAGCATTAA
Upstream 100 bases:
>100_bases TCCTTCTTTTCAACAGGGATCACATGGATGTGTGATCCCTGTTGTGCTTTAATCGGGCATAATAACCTTATTCTTAATTG GTTGTTTGCGGGAGTGTGCC
Downstream 100 bases:
>100_bases CAGCCGATTTTCAGCTTGATTGCAGTTTTTAAGCAATTTACAAGATTTATGCTAGTGGCGTTTCATCGTGCTTCCTCAGA GCGATCGCTATACTCTTGCC
Product: phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MILYFVRHGIAEDWAESGLDQDRRLTERGRKRIRQCAQALRLLEIKPQIILSSPYPRAAETALIIAEALGTDPPVLKEQL QPDGANSHLLTECLNPDWNEVMIVGHQPNLSEYVAHLAGYGTNLIFKKGTVCRVELQGEHGQVSWLLPPKVLIALAEARQ AKPAKPAKH
Sequences:
>Translated_169_residues MILYFVRHGIAEDWAESGLDQDRRLTERGRKRIRQCAQALRLLEIKPQIILSSPYPRAAETALIIAEALGTDPPVLKEQL QPDGANSHLLTECLNPDWNEVMIVGHQPNLSEYVAHLAGYGTNLIFKKGTVCRVELQGEHGQVSWLLPPKVLIALAEARQ AKPAKPAKH >Mature_169_residues MILYFVRHGIAEDWAESGLDQDRRLTERGRKRIRQCAQALRLLEIKPQIILSSPYPRAAETALIIAEALGTDPPVLKEQL QPDGANSHLLTECLNPDWNEVMIVGHQPNLSEYVAHLAGYGTNLIFKKGTVCRVELQGEHGQVSWLLPPKVLIALAEARQ AKPAKPAKH
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR004449 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 18839; Mature: 18839
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYFVRHGIAEDWAESGLDQDRRLTERGRKRIRQCAQALRLLEIKPQIILSSPYPRAAE CEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH TALIIAEALGTDPPVLKEQLQPDGANSHLLTECLNPDWNEVMIVGHQPNLSEYVAHLAGY HHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC GTNLIFKKGTVCRVELQGEHGQVSWLLPPKVLIALAEARQAKPAKPAKH CCCEEEECCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MILYFVRHGIAEDWAESGLDQDRRLTERGRKRIRQCAQALRLLEIKPQIILSSPYPRAAE CEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH TALIIAEALGTDPPVLKEQLQPDGANSHLLTECLNPDWNEVMIVGHQPNLSEYVAHLAGY HHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC GTNLIFKKGTVCRVELQGEHGQVSWLLPPKVLIALAEARQAKPAKPAKH CCCEEEECCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8787020 [H]