| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900775
Identifier: 159900775
GI number: 159900775
Start: 5438048
End: 5438623
Strand: Direct
Name: 159900775
Synonym: Haur_4262
Alternate gene names: NA
Gene position: 5438048-5438623 (Clockwise)
Preceding gene: 159900771
Following gene: 159900778
Centisome position: 85.68
GC content: 47.92
Gene sequence:
>576_bases ATGAATTACTATCAGGATGTGTTCCCATGGGAAGTCGTCGTCGTAAGCTCGGTCATTTTAGCTTCGATGGCGCTCTTTTC CACAGTTCGTTGGATTTTTCGGCCACAACCTAAAGTGTTTCCAGGCAAACGGATCGTGCTATTCGTGATTTGTCTTGGCT TGATATTTTATGCCTTCCGTTTTGTGCCAAACTTTCGCGATAAATTTGAGCTTGGGCTAAGCACCAATCGCGCCGCAACC AGCGATAACCCGATCTTGCCCGAATTAATGACCCCACGCTTTACCCAAGATCAAAATACGGTCTATCAAGCGGGTATTCG CACGATTCAGGCCCAACGTGGCTGGACAATTACCAACCGCTCCGATAGCCAAAAAGCGCTCAAAGTCGATATTGATGTAA TGTTAGGGATCTTCACCGATGAGTTAACGATCGCCTTTATTGATGAAGGCGGCCAAACTCGCGTGGATATTCAATCGGCA TCCAAGGTTGGCGGTGCAGATCTTGGGGCAAATCGGCGGCATATTCGCCAATTGGTACGGGCACTTGAGGAAGATTTAGG CACACCAAGCCAATAA
Upstream 100 bases:
>100_bases AGGCTCGTCAACAGCTTGCACTGAATGTGGTAGCATAGCAATTATCGGCCAAAGACCAAGGCAACGTTTGTAATTCGTTC TTTTTTGCCTAGGAGGATGC
Downstream 100 bases:
>100_bases AGCGTTACGCCAACAAGGGTAGTTTAACATGGCTACCCTTGTTGTTCGTTCATTCAACTACCACAATTCAGTACGTAAGC CAAGCACTGCGCCTAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNYYQDVFPWEVVVVSSVILASMALFSTVRWIFRPQPKVFPGKRIVLFVICLGLIFYAFRFVPNFRDKFELGLSTNRAAT SDNPILPELMTPRFTQDQNTVYQAGIRTIQAQRGWTITNRSDSQKALKVDIDVMLGIFTDELTIAFIDEGGQTRVDIQSA SKVGGADLGANRRHIRQLVRALEEDLGTPSQ
Sequences:
>Translated_191_residues MNYYQDVFPWEVVVVSSVILASMALFSTVRWIFRPQPKVFPGKRIVLFVICLGLIFYAFRFVPNFRDKFELGLSTNRAAT SDNPILPELMTPRFTQDQNTVYQAGIRTIQAQRGWTITNRSDSQKALKVDIDVMLGIFTDELTIAFIDEGGQTRVDIQSA SKVGGADLGANRRHIRQLVRALEEDLGTPSQ >Mature_191_residues MNYYQDVFPWEVVVVSSVILASMALFSTVRWIFRPQPKVFPGKRIVLFVICLGLIFYAFRFVPNFRDKFELGLSTNRAAT SDNPILPELMTPRFTQDQNTVYQAGIRTIQAQRGWTITNRSDSQKALKVDIDVMLGIFTDELTIAFIDEGGQTRVDIQSA SKVGGADLGANRRHIRQLVRALEEDLGTPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21589; Mature: 21589
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYYQDVFPWEVVVVSSVILASMALFSTVRWIFRPQPKVFPGKRIVLFVICLGLIFYAFR CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FVPNFRDKFELGLSTNRAATSDNPILPELMTPRFTQDQNTVYQAGIRTIQAQRGWTITNR HCCCCCHHEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC SDSQKALKVDIDVMLGIFTDELTIAFIDEGGQTRVDIQSASKVGGADLGANRRHIRQLVR CCCCCEEEEHHHHHEEEECCCEEEEEEECCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHH ALEEDLGTPSQ HHHHHCCCCCC >Mature Secondary Structure MNYYQDVFPWEVVVVSSVILASMALFSTVRWIFRPQPKVFPGKRIVLFVICLGLIFYAFR CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH FVPNFRDKFELGLSTNRAATSDNPILPELMTPRFTQDQNTVYQAGIRTIQAQRGWTITNR HCCCCCHHEEECCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC SDSQKALKVDIDVMLGIFTDELTIAFIDEGGQTRVDIQSASKVGGADLGANRRHIRQLVR CCCCCEEEEHHHHHEEEECCCEEEEEEECCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHH ALEEDLGTPSQ HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA