| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is kinE [H]
Identifier: 159900772
GI number: 159900772
Start: 5433048
End: 5435462
Strand: Reverse
Name: kinE [H]
Synonym: Haur_4259
Alternate gene names: 159900772
Gene position: 5435462-5433048 (Counterclockwise)
Preceding gene: 159900773
Following gene: 159900767
Centisome position: 85.64
GC content: 51.06
Gene sequence:
>2415_bases ATGGAAGAAATCCTCATCATCGACGATAGCCGTCAGATAGCCGATTTTTTGGCTGAGACGGTGCTGCCATACTATGGCTA TCGTTCGCGCGTCGTACCCACAGGCTGGGAAGGTCTGGCTTTTTTGAAACAACGCCAGCCCGACCTAATTTTGCTTGATC TCCAACTCCCCGACACCTCGGGGCTTGATGTGCTTCGCCAAATGGGCGAACTTGGCTACGATATTCCGGTGATTTTGATG ACCGCCCATGGTACCGAGCAAACCGCTGTCGAGGCCTTTCGACTTGGTGCCAAAAATTATTTGATCAAGCCTTTTGATGC TTCGGAAGCGGGCGCAGCAATTGAACGTGCCCTGCGCGAACGCCGTTTGCAGCGCGAAAAAGAGGTGCTTACCCGCACCT TGCAGCAACGCTTGCAGGAGTTGACGATTCTCTCCAGCGTTGGTAAATCGGTGACCTCGCTGCTTGATCTCGAAGAATTG CTCGAACGGATCGTCGATGCTGGGGTGTATCTGACCCACGCCGAAGAAGGCTATTTGCTGTTGCGCGATGGTGATGAATT ATATTTGCGGGCGGCTAAAAATCTCGGCGAGGAGCGTGTGCAGCGTTTTCGGGTCAAGATGGATGACAATGTGGCAGGCC AAGTTATTCGCACCGTCAAGCCAATTCGGCTTGATCGCTCGCAGCACCAAGATTTAAAACTGCGCACTGGGCTTTTGGTG CAGGCAATGTTGCAAGTTCCCTTGATTGTTGGTCGCCATGCGATTGGTGTATTGGCGGTTGATAATCGGGTGCAGCAACG TACCTTCAGCGAAAACGACCAATATTTGCTCTCAGCGATTGCCGATTATGCAGCGATTGCGATTGAAAATTCGCGCTTGT TTAAATCGACCCGCGATTCTGAGCAACGCTACCGCGAATTATTCGATAACGCCAACGATATGATCTTCACGCTTGATCCA CAGCTACGAATTGCCTCGATCAATCGTCAAGGGGTCAAATTGTTGGGCATGACCGTGGCTGAAATGATGCAGCGCACCTT GATTTCGCTGTGTGTGCCCGACGATCAAGCAGCAATCGAACATCAATTGCAACGCCAACTAGCCAAAGCTGCTGGTGATG GCGGTGCGTTTCCGTTGACTTTGCGTCGTGCCAATGGCGAAGATTTGCATATTGAAGTCAGCGCCCAATTGATGCAGCGT GGCGATCAGGTAATTGGTCTGCACTGTATTGCGCGTGATGTGACCGACCGCCGCCGCTTGGAATTGCAACTATTGCAGGC CGAAAAACTCTCAGCGATTGGCCAATTGGTGGCTGGGGTTGCTCACGAGTTGAACAATCCGATGACCAGCATCAAAGGCT TTGCTGAGCTATTGCTGCGCCGCAAAGATTTAGATGATGATGCCCGTACCGATCTGAATTACATTAATAACCAAGCTGAA CGAGCAGCGCGAATTGTGACCAACCTGCTGACGTTTGCCCGTGAGCATCAGCCGCAGCGGGTTTTAGTCGATGTCAATAA AGTTATCGACGATACGCTGAGCTTGCATAGCTATCACTTGCGCGTCGATAACATCAAAGTTCAACGCCAATTCGAGCCAG AGCTGCCAACCACCGTCGCTGATCCGTATCAATTACAACAGGTTTTTCTGAACTTGATTGGCAATGCCCATCAAGCTATG GCCGAAAAAGGCGGCGGCGGTTTCTTGACCGTCAAAACCGAGCGGGTTGATGATGAAATTCGGATTAACATCGGCGATAC TGGCCCCGGTATTCCCCAACACCTCGTCGGGCGGATCTTCGATCCATTTTTTACCACCAAGCCTGTTGGCAAGGGTACAG GGCTAGGTTTATCGATCTGCTACAACATTCTGCATGATCATGGTGGCAATATTTGGGTTGATAGCGTGGCCAACGAAGGC ACAACCTTCCATTTGGCCTTGCCGGTGGTTCAGGGCGATAATCCTGAGTTGATCAACGACGATGATCGTGAAACCACGAT TAAGCCCGACCAAGCCTATAAAATTTTGGTGGTTGACGATGAAGAAGGCGTGGCCCAAGTGATTCAGCGCTTGGTGCGCG ATTTGGGTCATCAGCCAGTGGTGGTGGCTAGTGGCGAGGCCGCCTTGCAAGCCGTTGATCAAGCGCCCTTCGATTTGATT CTGAGCGATGTTAAAATGCCAGGCATGAACGGCTTCCAGCTGTATCGAGCTTTGCAACAAAAAGCCCCTGAATTGGCCAA ACATTTTATCTTTATCACTGGCGATACGATGAGTCCAGCCACGATCACCGCGATGCGCCAAATTGGCACACCAATGATTG CCAAGCCCTTCTCAGCCAAAAAACTCGAACGTACAATCAACGAGTTTATGGCTCGCGAAGAAGCATTGCAACGCGAGGCC GAAATTCAGCAATAG
Upstream 100 bases:
>100_bases TGCGGTTAAACCTATTGCGTAGAGTGATGCGACTCGTTAGAATAGCTATGAGTCCAACAATCTGCCCATACAACACGCAA CAACACGCGAAGGATGTCCC
Downstream 100 bases:
>100_bases TTGAGGTTGGGGGATCGGGGATTCGGTTATTGGGGATCGGGCTGCATGGCCTGATCCTCTTTTGATCCACGAAGAGCACG AAGGTACAGGAAGGGCAATT
Product: multi-sensor hybrid histidine kinase
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MEEILIIDDSRQIADFLAETVLPYYGYRSRVVPTGWEGLAFLKQRQPDLILLDLQLPDTSGLDVLRQMGELGYDIPVILM TAHGTEQTAVEAFRLGAKNYLIKPFDASEAGAAIERALRERRLQREKEVLTRTLQQRLQELTILSSVGKSVTSLLDLEEL LERIVDAGVYLTHAEEGYLLLRDGDELYLRAAKNLGEERVQRFRVKMDDNVAGQVIRTVKPIRLDRSQHQDLKLRTGLLV QAMLQVPLIVGRHAIGVLAVDNRVQQRTFSENDQYLLSAIADYAAIAIENSRLFKSTRDSEQRYRELFDNANDMIFTLDP QLRIASINRQGVKLLGMTVAEMMQRTLISLCVPDDQAAIEHQLQRQLAKAAGDGGAFPLTLRRANGEDLHIEVSAQLMQR GDQVIGLHCIARDVTDRRRLELQLLQAEKLSAIGQLVAGVAHELNNPMTSIKGFAELLLRRKDLDDDARTDLNYINNQAE RAARIVTNLLTFAREHQPQRVLVDVNKVIDDTLSLHSYHLRVDNIKVQRQFEPELPTTVADPYQLQQVFLNLIGNAHQAM AEKGGGGFLTVKTERVDDEIRINIGDTGPGIPQHLVGRIFDPFFTTKPVGKGTGLGLSICYNILHDHGGNIWVDSVANEG TTFHLALPVVQGDNPELINDDDRETTIKPDQAYKILVVDDEEGVAQVIQRLVRDLGHQPVVVASGEAALQAVDQAPFDLI LSDVKMPGMNGFQLYRALQQKAPELAKHFIFITGDTMSPATITAMRQIGTPMIAKPFSAKKLERTINEFMAREEALQREA EIQQ
Sequences:
>Translated_804_residues MEEILIIDDSRQIADFLAETVLPYYGYRSRVVPTGWEGLAFLKQRQPDLILLDLQLPDTSGLDVLRQMGELGYDIPVILM TAHGTEQTAVEAFRLGAKNYLIKPFDASEAGAAIERALRERRLQREKEVLTRTLQQRLQELTILSSVGKSVTSLLDLEEL LERIVDAGVYLTHAEEGYLLLRDGDELYLRAAKNLGEERVQRFRVKMDDNVAGQVIRTVKPIRLDRSQHQDLKLRTGLLV QAMLQVPLIVGRHAIGVLAVDNRVQQRTFSENDQYLLSAIADYAAIAIENSRLFKSTRDSEQRYRELFDNANDMIFTLDP QLRIASINRQGVKLLGMTVAEMMQRTLISLCVPDDQAAIEHQLQRQLAKAAGDGGAFPLTLRRANGEDLHIEVSAQLMQR GDQVIGLHCIARDVTDRRRLELQLLQAEKLSAIGQLVAGVAHELNNPMTSIKGFAELLLRRKDLDDDARTDLNYINNQAE RAARIVTNLLTFAREHQPQRVLVDVNKVIDDTLSLHSYHLRVDNIKVQRQFEPELPTTVADPYQLQQVFLNLIGNAHQAM AEKGGGGFLTVKTERVDDEIRINIGDTGPGIPQHLVGRIFDPFFTTKPVGKGTGLGLSICYNILHDHGGNIWVDSVANEG TTFHLALPVVQGDNPELINDDDRETTIKPDQAYKILVVDDEEGVAQVIQRLVRDLGHQPVVVASGEAALQAVDQAPFDLI LSDVKMPGMNGFQLYRALQQKAPELAKHFIFITGDTMSPATITAMRQIGTPMIAKPFSAKKLERTINEFMAREEALQREA EIQQ >Mature_804_residues MEEILIIDDSRQIADFLAETVLPYYGYRSRVVPTGWEGLAFLKQRQPDLILLDLQLPDTSGLDVLRQMGELGYDIPVILM TAHGTEQTAVEAFRLGAKNYLIKPFDASEAGAAIERALRERRLQREKEVLTRTLQQRLQELTILSSVGKSVTSLLDLEEL LERIVDAGVYLTHAEEGYLLLRDGDELYLRAAKNLGEERVQRFRVKMDDNVAGQVIRTVKPIRLDRSQHQDLKLRTGLLV QAMLQVPLIVGRHAIGVLAVDNRVQQRTFSENDQYLLSAIADYAAIAIENSRLFKSTRDSEQRYRELFDNANDMIFTLDP QLRIASINRQGVKLLGMTVAEMMQRTLISLCVPDDQAAIEHQLQRQLAKAAGDGGAFPLTLRRANGEDLHIEVSAQLMQR GDQVIGLHCIARDVTDRRRLELQLLQAEKLSAIGQLVAGVAHELNNPMTSIKGFAELLLRRKDLDDDARTDLNYINNQAE RAARIVTNLLTFAREHQPQRVLVDVNKVIDDTLSLHSYHLRVDNIKVQRQFEPELPTTVADPYQLQQVFLNLIGNAHQAM AEKGGGGFLTVKTERVDDEIRINIGDTGPGIPQHLVGRIFDPFFTTKPVGKGTGLGLSICYNILHDHGGNIWVDSVANEG TTFHLALPVVQGDNPELINDDDRETTIKPDQAYKILVVDDEEGVAQVIQRLVRDLGHQPVVVASGEAALQAVDQAPFDLI LSDVKMPGMNGFQLYRALQQKAPELAKHFIFITGDTMSPATITAMRQIGTPMIAKPFSAKKLERTINEFMAREEALQREA EIQQ
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=246, Percent_Identity=36.5853658536585, Blast_Score=147, Evalue=4e-36, Organism=Escherichia coli, GI1788549, Length=278, Percent_Identity=35.2517985611511, Blast_Score=143, Evalue=4e-35, Organism=Escherichia coli, GI1790300, Length=272, Percent_Identity=35.6617647058824, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI48994928, Length=358, Percent_Identity=27.6536312849162, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI87081816, Length=331, Percent_Identity=26.8882175226586, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788713, Length=359, Percent_Identity=27.2980501392758, Blast_Score=100, Evalue=5e-22, Organism=Escherichia coli, GI145693157, Length=277, Percent_Identity=29.2418772563177, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1788550, Length=143, Percent_Identity=34.2657342657343, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789149, Length=238, Percent_Identity=28.1512605042017, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI1790299, Length=123, Percent_Identity=35.7723577235772, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=34.4827586206897, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786600, Length=283, Percent_Identity=27.5618374558304, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788394, Length=123, Percent_Identity=34.1463414634146, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1786784, Length=117, Percent_Identity=32.4786324786325, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786911, Length=119, Percent_Identity=37.8151260504202, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=27.8969957081545, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=24.3697478991597, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786783, Length=228, Percent_Identity=27.1929824561404, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790346, Length=208, Percent_Identity=25.9615384615385, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789402, Length=126, Percent_Identity=35.7142857142857, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1790860, Length=118, Percent_Identity=32.2033898305085, Blast_Score=64, Evalue=5e-11, Organism=Escherichia coli, GI1789808, Length=217, Percent_Identity=23.5023041474654, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 90049; Mature: 90049
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEILIIDDSRQIADFLAETVLPYYGYRSRVVPTGWEGLAFLKQRQPDLILLDLQLPDTS CCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCC GLDVLRQMGELGYDIPVILMTAHGTEQTAVEAFRLGAKNYLIKPFDASEAGAAIERALRE CHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH RRLQREKEVLTRTLQQRLQELTILSSVGKSVTSLLDLEELLERIVDAGVYLTHAEEGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE LRDGDELYLRAAKNLGEERVQRFRVKMDDNVAGQVIRTVKPIRLDRSQHQDLKLRTGLLV EECCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH QAMLQVPLIVGRHAIGVLAVDNRVQQRTFSENDQYLLSAIADYAAIAIENSRLFKSTRDS HHHHHHHHHHCCHHEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHEEEECCHHHHHCCHH EQRYRELFDNANDMIFTLDPQLRIASINRQGVKLLGMTVAEMMQRTLISLCVPDDQAAIE HHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH HQLQRQLAKAAGDGGAFPLTLRRANGEDLHIEVSAQLMQRGDQVIGLHCIARDVTDRRRL HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCEEEHHHHHHHHHHHHHH ELQLLQAEKLSAIGQLVAGVAHELNNPMTSIKGFAELLLRRKDLDDDARTDLNYINNQAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RAARIVTNLLTFAREHQPQRVLVDVNKVIDDTLSLHSYHLRVDNIKVQRQFEPELPTTVA HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCC DPYQLQQVFLNLIGNAHQAMAEKGGGGFLTVKTERVDDEIRINIGDTGPGIPQHLVGRIF CHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH DPFFTTKPVGKGTGLGLSICYNILHDHGGNIWVDSVANEGTTFHLALPVVQGDNPELIND CCHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCC DDRETTIKPDQAYKILVVDDEEGVAQVIQRLVRDLGHQPVVVASGEAALQAVDQAPFDLI CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCHHHH LSDVKMPGMNGFQLYRALQQKAPELAKHFIFITGDTMSPATITAMRQIGTPMIAKPFSAK HHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHH KLERTINEFMAREEALQREAEIQQ HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEEILIIDDSRQIADFLAETVLPYYGYRSRVVPTGWEGLAFLKQRQPDLILLDLQLPDTS CCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCC GLDVLRQMGELGYDIPVILMTAHGTEQTAVEAFRLGAKNYLIKPFDASEAGAAIERALRE CHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHH RRLQREKEVLTRTLQQRLQELTILSSVGKSVTSLLDLEELLERIVDAGVYLTHAEEGYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEE LRDGDELYLRAAKNLGEERVQRFRVKMDDNVAGQVIRTVKPIRLDRSQHQDLKLRTGLLV EECCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH QAMLQVPLIVGRHAIGVLAVDNRVQQRTFSENDQYLLSAIADYAAIAIENSRLFKSTRDS HHHHHHHHHHCCHHEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHEEEECCHHHHHCCHH EQRYRELFDNANDMIFTLDPQLRIASINRQGVKLLGMTVAEMMQRTLISLCVPDDQAAIE HHHHHHHHCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH HQLQRQLAKAAGDGGAFPLTLRRANGEDLHIEVSAQLMQRGDQVIGLHCIARDVTDRRRL HHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCEEEHHHHHHHHHHHHHH ELQLLQAEKLSAIGQLVAGVAHELNNPMTSIKGFAELLLRRKDLDDDARTDLNYINNQAE HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RAARIVTNLLTFAREHQPQRVLVDVNKVIDDTLSLHSYHLRVDNIKVQRQFEPELPTTVA HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCCCCC DPYQLQQVFLNLIGNAHQAMAEKGGGGFLTVKTERVDDEIRINIGDTGPGIPQHLVGRIF CHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHH DPFFTTKPVGKGTGLGLSICYNILHDHGGNIWVDSVANEGTTFHLALPVVQGDNPELIND CCHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCC DDRETTIKPDQAYKILVVDDEEGVAQVIQRLVRDLGHQPVVVASGEAALQAVDQAPFDLI CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCHHHH LSDVKMPGMNGFQLYRALQQKAPELAKHFIFITGDTMSPATITAMRQIGTPMIAKPFSAK HHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHH KLERTINEFMAREEALQREAEIQQ HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]