| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900768
Identifier: 159900768
GI number: 159900768
Start: 5428995
End: 5429657
Strand: Direct
Name: 159900768
Synonym: Haur_4255
Alternate gene names: NA
Gene position: 5428995-5429657 (Clockwise)
Preceding gene: 159900757
Following gene: 159900769
Centisome position: 85.54
GC content: 48.87
Gene sequence:
>663_bases ATGCGTTTTTGGCCGTTATGGCTTATGCTTTTGATCATCAGTTTGGTTGGCTGCGGAGCCACTGCGCCAGCATTACCACC GATCGCTGCCAACCAGCCCAACCAAATTTTGTTGCTCAACGAGCTAGATGGAGTGGGAGCCAATAGCACTATCACCGTGC TAGCACCCACAATTTTCAGCCAACCCAGACATTTGTTGGCCGCCGCGATCGAGCTTGGCGATCAACCGAATGCTTACCAA CCAACCCTGAGTATTCCAGCTCAAACGCTTACAATAACCAATAGCTATGGAATTTTGCGGGTGAATGGTGTGCTTAAAAG TAGTGCTGAATTCGAGCCAATCAGCGTCAAAGTGGTTGAACCAACCAGCATCAGCCTTGGCGAGCTTAACCAAAACTTGG CAGTTTACAATAATCAAGTCGTGCGGCTCAATGGCACACTCCTGCTCAAAGATCAAGCAGCTTTATTAGTTGAAGAAGTT GGTAGCGGCGGTGTGCCCACTGCTAATGCCGCCCAAATCACCGTCGAGCAAATTCCCAGCCAATCGCCGATTATTCAGCA ATTGCCCAACCAGCAAGGCAATATTCGTTATGGTCAACTGACGATTATTGGGATGTTGCGTGGGAAAACGTTATACGTAT TTTGGCTTGAAGCGCAGCCCTGA
Upstream 100 bases:
>100_bases CGCCAAAAGTCTATAGCCCGATCCTTCGTGTTCTGCGAGGATCACTCACTATATAAATGGTACAATCGGCAGCAGTTTAT AGGCTTGTTTGGAGAATTGC
Downstream 100 bases:
>100_bases GCCAAAAATTTAATATGTGCAATTTTAGCCCGTTTGCAGGCCAGCAAAACGGGCTTTTTTTAATGGGCTGAATGTGCTAC GCTCGATGTTAAAAACTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRFWPLWLMLLIISLVGCGATAPALPPIAANQPNQILLLNELDGVGANSTITVLAPTIFSQPRHLLAAAIELGDQPNAYQ PTLSIPAQTLTITNSYGILRVNGVLKSSAEFEPISVKVVEPTSISLGELNQNLAVYNNQVVRLNGTLLLKDQAALLVEEV GSGGVPTANAAQITVEQIPSQSPIIQQLPNQQGNIRYGQLTIIGMLRGKTLYVFWLEAQP
Sequences:
>Translated_220_residues MRFWPLWLMLLIISLVGCGATAPALPPIAANQPNQILLLNELDGVGANSTITVLAPTIFSQPRHLLAAAIELGDQPNAYQ PTLSIPAQTLTITNSYGILRVNGVLKSSAEFEPISVKVVEPTSISLGELNQNLAVYNNQVVRLNGTLLLKDQAALLVEEV GSGGVPTANAAQITVEQIPSQSPIIQQLPNQQGNIRYGQLTIIGMLRGKTLYVFWLEAQP >Mature_220_residues MRFWPLWLMLLIISLVGCGATAPALPPIAANQPNQILLLNELDGVGANSTITVLAPTIFSQPRHLLAAAIELGDQPNAYQ PTLSIPAQTLTITNSYGILRVNGVLKSSAEFEPISVKVVEPTSISLGELNQNLAVYNNQVVRLNGTLLLKDQAALLVEEV GSGGVPTANAAQITVEQIPSQSPIIQQLPNQQGNIRYGQLTIIGMLRGKTLYVFWLEAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23610; Mature: 23610
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFWPLWLMLLIISLVGCGATAPALPPIAANQPNQILLLNELDGVGANSTITVLAPTIFS CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECHHHC QPRHLLAAAIELGDQPNAYQPTLSIPAQTLTITNSYGILRVNGVLKSSAEFEPISVKVVE CCHHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCEEEECCEECCCCCCCCEEEEEEC PTSISLGELNQNLAVYNNQVVRLNGTLLLKDQAALLVEEVGSGGVPTANAAQITVEQIPS CCCCCHHHCCCCEEEECCEEEEECCEEEEECCHHHHHHHHCCCCCCCCCCEEEEHHHCCC QSPIIQQLPNQQGNIRYGQLTIIGMLRGKTLYVFWLEAQP CCCHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure MRFWPLWLMLLIISLVGCGATAPALPPIAANQPNQILLLNELDGVGANSTITVLAPTIFS CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECHHHC QPRHLLAAAIELGDQPNAYQPTLSIPAQTLTITNSYGILRVNGVLKSSAEFEPISVKVVE CCHHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCEEEECCEECCCCCCCCEEEEEEC PTSISLGELNQNLAVYNNQVVRLNGTLLLKDQAALLVEEVGSGGVPTANAAQITVEQIPS CCCCCHHHCCCCEEEECCEEEEECCEEEEECCHHHHHHHHCCCCCCCCCCEEEEHHHCCC QSPIIQQLPNQQGNIRYGQLTIIGMLRGKTLYVFWLEAQP CCCHHHHCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA