| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900757
Identifier: 159900757
GI number: 159900757
Start: 5412049
End: 5413605
Strand: Direct
Name: 159900757
Synonym: Haur_4244
Alternate gene names: NA
Gene position: 5412049-5413605 (Clockwise)
Preceding gene: 159900756
Following gene: 159900768
Centisome position: 85.27
GC content: 42.65
Gene sequence:
>1557_bases ATGAACCACGATCTAGCGGCAGTGCTTGATTATCTTGATCAGCGTTTTGGCTCGTCTGATCGACAAGCTTTTGAAGAACG CTTAGCCCAAGAACCACAATTACGTGAGTTGTTGGAAAAAACCAAATCCATGCAACGCAACTTACGCTCGATCTTTGGTC AGAGCGAGCGTTTAGTTGCGCCAAGCCGCAGTCGGCGACGAGTGGCCAAATTTAGCAGGTTCAAATACACAATCAATGCG CTGATGTTGGTTGTGTTGCTTTTAGGTGGGGTCTATTTGAAAAAGCAATTTGATATCGCGCCCCAAATCAGCAACGAGCC AACCTATTTAGCTTTAGCCAACGAGGAAACATCACTGCCCCAGCAACAAATGCTGTTGGTGAAAGGGATTGATCATGAGC AAAATCACTTTGTCCGCGCCATGCAAGATGATCAAGTGATGTGGCAAGCCAATAATGTCGATGCATTAATCATTGCTGAT AATGGCGATCGGATTGAGTTGAGTAAAACTCAATCGCATTATGTCTTAAGTCGTAAAAGCAGCGATGATAACCCTACGTG GCAACAATCTCTACCATTGCAACCCGACACCAGCACTGTTGTAGGACTCTACCAGAGTGCCAATCAACAGGAGCTTTATC TGACAGCCCATACAAAAAAGCCAACCAACCAAACAGCAGATTTAGCCCAATCGGTCACGATCATTCCCCAGCAACAAGTT GATACAACCGTCTATCCATCGGCGAGCTATCCATTAGGTGTAAGTGCCGAGCAGTCAAACTCAATCACCGATGTTTTGGA TGATGTGGCAGGTTCAGTAGATCCAATGTCTAGCCCAATCAATCCACCAAATGCACAGGCTGGTCAACAGGCCCAACAAG AAGCTGGCCAAATTCCAACGAATGTTGTAACTAACCAACAATTGTTGATTATTGATAGCACAAATGGCACAATTAAACAT CCAAATCAGCAATGCGATTGTCGCTATCTGGCAAGTAATCAAACCTTATATCCCTATGATCAAGCATTTCCATTTACCGA TTACTTCAATTATGCTATCTCCGCAAACAACCCTAATCTGCTCAGCCTCATAACTTCTGATCAAGATGTTATAACCTACG ATCTCAAAAACCAAACAATCCTCAAGACAAGCAAACTTGCTAGCAATCAACAGCTCAATGATCATTTATATGCTTCACAG CTACAATTTGATCTATTTGGCCAAACTACGTCGATCAATCCTGACCTCGCTAGGATTACCGATGTTCAATTTAGTGGCAA TCAACAAACAATTATCATTCGTGATAGTACCGAAGATAAAACAACTTTTTATGCGTTTGATCGCCTAAGTGGCAAACAAT TATGGCAACGTTCGATCTTAGCTTCAACCGTGAGTTTTACGCCTAATTGGGATGGTTCTGAGGTGTATGCTGTGCATACA TCAAAACCAACTGAAACAGGTTTTAGTACACTCTATACCGTGCAAGCAACGAAAACGACATTTATCGATTACCCGCAGCA ACAATTTGAGGAAATAATCATGGTTTACGATTTCTAA
Upstream 100 bases:
>100_bases GCTACGAACAAATTGCAGCTATTTTAGAATGCCCAATTGGTACAGTGCGGTCGCGTTTACACACTGCCCATGCACAACTA CGCAACCACTTGGAGGATGT
Downstream 100 bases:
>100_bases AGACCCGCTGCTCAACCAAAGCAGCGGGTCTTACATCCAAGCCTAGTTTTTGCTAACAATCGGTGCAGTTATGCGATAAA TATTGGCAGTGCTGGGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF
Sequences:
>Translated_518_residues MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF >Mature_518_residues MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58393; Mature: 58393
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PSRSRRRVAKFSRFKYTINALMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCC QQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIADNGDRIELSKTQSHYVLSRKS HHHHHEEECCCCCCCHHEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC SDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCC DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPT CCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC NVVTNQQLLIIDSTNGTIKHPNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNL CEECCCEEEEEECCCCCEECCCCCCCEEEEECCCEECCCCCCCCCHHHCEEEEECCCCCE LSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQLQFDLFGQTTSINPDLARIT EEEEECCCCEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHEE DVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT EEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEC SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF CCCCCCCCEEEEEEEECCEEEECCCHHHHCCEEEEECC >Mature Secondary Structure MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC PSRSRRRVAKFSRFKYTINALMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCC QQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIADNGDRIELSKTQSHYVLSRKS HHHHHEEECCCCCCCHHEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC SDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCC DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPT CCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC NVVTNQQLLIIDSTNGTIKHPNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNL CEECCCEEEEEECCCCCEECCCCCCCEEEEECCCEECCCCCCCCCHHHCEEEEECCCCCE LSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQLQFDLFGQTTSINPDLARIT EEEEECCCCEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHEE DVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT EEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEC SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF CCCCCCCCEEEEEEEECCEEEECCCHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA