Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900757

Identifier: 159900757

GI number: 159900757

Start: 5412049

End: 5413605

Strand: Direct

Name: 159900757

Synonym: Haur_4244

Alternate gene names: NA

Gene position: 5412049-5413605 (Clockwise)

Preceding gene: 159900756

Following gene: 159900768

Centisome position: 85.27

GC content: 42.65

Gene sequence:

>1557_bases
ATGAACCACGATCTAGCGGCAGTGCTTGATTATCTTGATCAGCGTTTTGGCTCGTCTGATCGACAAGCTTTTGAAGAACG
CTTAGCCCAAGAACCACAATTACGTGAGTTGTTGGAAAAAACCAAATCCATGCAACGCAACTTACGCTCGATCTTTGGTC
AGAGCGAGCGTTTAGTTGCGCCAAGCCGCAGTCGGCGACGAGTGGCCAAATTTAGCAGGTTCAAATACACAATCAATGCG
CTGATGTTGGTTGTGTTGCTTTTAGGTGGGGTCTATTTGAAAAAGCAATTTGATATCGCGCCCCAAATCAGCAACGAGCC
AACCTATTTAGCTTTAGCCAACGAGGAAACATCACTGCCCCAGCAACAAATGCTGTTGGTGAAAGGGATTGATCATGAGC
AAAATCACTTTGTCCGCGCCATGCAAGATGATCAAGTGATGTGGCAAGCCAATAATGTCGATGCATTAATCATTGCTGAT
AATGGCGATCGGATTGAGTTGAGTAAAACTCAATCGCATTATGTCTTAAGTCGTAAAAGCAGCGATGATAACCCTACGTG
GCAACAATCTCTACCATTGCAACCCGACACCAGCACTGTTGTAGGACTCTACCAGAGTGCCAATCAACAGGAGCTTTATC
TGACAGCCCATACAAAAAAGCCAACCAACCAAACAGCAGATTTAGCCCAATCGGTCACGATCATTCCCCAGCAACAAGTT
GATACAACCGTCTATCCATCGGCGAGCTATCCATTAGGTGTAAGTGCCGAGCAGTCAAACTCAATCACCGATGTTTTGGA
TGATGTGGCAGGTTCAGTAGATCCAATGTCTAGCCCAATCAATCCACCAAATGCACAGGCTGGTCAACAGGCCCAACAAG
AAGCTGGCCAAATTCCAACGAATGTTGTAACTAACCAACAATTGTTGATTATTGATAGCACAAATGGCACAATTAAACAT
CCAAATCAGCAATGCGATTGTCGCTATCTGGCAAGTAATCAAACCTTATATCCCTATGATCAAGCATTTCCATTTACCGA
TTACTTCAATTATGCTATCTCCGCAAACAACCCTAATCTGCTCAGCCTCATAACTTCTGATCAAGATGTTATAACCTACG
ATCTCAAAAACCAAACAATCCTCAAGACAAGCAAACTTGCTAGCAATCAACAGCTCAATGATCATTTATATGCTTCACAG
CTACAATTTGATCTATTTGGCCAAACTACGTCGATCAATCCTGACCTCGCTAGGATTACCGATGTTCAATTTAGTGGCAA
TCAACAAACAATTATCATTCGTGATAGTACCGAAGATAAAACAACTTTTTATGCGTTTGATCGCCTAAGTGGCAAACAAT
TATGGCAACGTTCGATCTTAGCTTCAACCGTGAGTTTTACGCCTAATTGGGATGGTTCTGAGGTGTATGCTGTGCATACA
TCAAAACCAACTGAAACAGGTTTTAGTACACTCTATACCGTGCAAGCAACGAAAACGACATTTATCGATTACCCGCAGCA
ACAATTTGAGGAAATAATCATGGTTTACGATTTCTAA

Upstream 100 bases:

>100_bases
GCTACGAACAAATTGCAGCTATTTTAGAATGCCCAATTGGTACAGTGCGGTCGCGTTTACACACTGCCCATGCACAACTA
CGCAACCACTTGGAGGATGT

Downstream 100 bases:

>100_bases
AGACCCGCTGCTCAACCAAAGCAGCGGGTCTTACATCCAAGCCTAGTTTTTGCTAACAATCGGTGCAGTTATGCGATAAA
TATTGGCAGTGCTGGGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA
LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD
NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV
DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH
PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ
LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT
SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF

Sequences:

>Translated_518_residues
MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA
LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD
NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV
DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH
PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ
LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT
SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF
>Mature_518_residues
MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVAPSRSRRRVAKFSRFKYTINA
LMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLPQQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIAD
NGDRIELSKTQSHYVLSRKSSDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV
DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPTNVVTNQQLLIIDSTNGTIKH
PNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNLLSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQ
LQFDLFGQTTSINPDLARITDVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT
SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58393; Mature: 58393

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PSRSRRRVAKFSRFKYTINALMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCC
QQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIADNGDRIELSKTQSHYVLSRKS
HHHHHEEECCCCCCCHHEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC
SDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV
CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCC
DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPT
CCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
NVVTNQQLLIIDSTNGTIKHPNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNL
CEECCCEEEEEECCCCCEECCCCCCCEEEEECCCEECCCCCCCCCHHHCEEEEECCCCCE
LSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQLQFDLFGQTTSINPDLARIT
EEEEECCCCEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHEE
DVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT
EEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEC
SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF
CCCCCCCCEEEEEEEECCEEEECCCHHHHCCEEEEECC
>Mature Secondary Structure
MNHDLAAVLDYLDQRFGSSDRQAFEERLAQEPQLRELLEKTKSMQRNLRSIFGQSERLVA
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PSRSRRRVAKFSRFKYTINALMLVVLLLGGVYLKKQFDIAPQISNEPTYLALANEETSLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCCCCCC
QQQMLLVKGIDHEQNHFVRAMQDDQVMWQANNVDALIIADNGDRIELSKTQSHYVLSRKS
HHHHHEEECCCCCCCHHEEEECCCCEEEEECCCCEEEEECCCCEEEEECCCCEEEEEECC
SDDNPTWQQSLPLQPDTSTVVGLYQSANQQELYLTAHTKKPTNQTADLAQSVTIIPQQQV
CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHEEECCCCCC
DTTVYPSASYPLGVSAEQSNSITDVLDDVAGSVDPMSSPINPPNAQAGQQAQQEAGQIPT
CCEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
NVVTNQQLLIIDSTNGTIKHPNQQCDCRYLASNQTLYPYDQAFPFTDYFNYAISANNPNL
CEECCCEEEEEECCCCCEECCCCCCCEEEEECCCEECCCCCCCCCHHHCEEEEECCCCCE
LSLITSDQDVITYDLKNQTILKTSKLASNQQLNDHLYASQLQFDLFGQTTSINPDLARIT
EEEEECCCCEEEEECCCCEEEEHHHHCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHEE
DVQFSGNQQTIIIRDSTEDKTTFYAFDRLSGKQLWQRSILASTVSFTPNWDGSEVYAVHT
EEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHEECCCCCCCCEEEEEEC
SKPTETGFSTLYTVQATKTTFIDYPQQQFEEIIMVYDF
CCCCCCCCEEEEEEEECCEEEECCCHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA