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The map label for this gene is yvdE [H]

Identifier: 159900728

GI number: 159900728

Start: 5370507

End: 5371268

Strand: Reverse

Name: yvdE [H]

Synonym: Haur_4215

Alternate gene names: 159900728

Gene position: 5371268-5370507 (Counterclockwise)

Preceding gene: 159900729

Following gene: 159900727

Centisome position: 84.63

GC content: 54.2

Gene sequence:

>762_bases
ATGCCATCAACTTTGCCGATTATTGGGATACCGTGCGCAACCTATGCCCGACCACATCCCTATCCTCTCGCTCATGGCAA
TAACGAAACCTATATTCGGGCAGTTGAAGTTGCAGGTGGCGTGCCGCTCTTAATTCCTTTGGTGCAGCACGAGGCCACGC
TGTTAGCGGCATTTCAGGCTGTCGATGGGTTGTTATTCGCTGGCGGCGTTGATCTCGACCCAGCTTACTATAGCGAGGAG
CCGCATCCAGCGCTTGGCTCGGTCAACCGCGAACAAGATCGGGTTGAGATGCAGCTGTTGGCTTGGGCCAAGCAATTTCA
TAAGCCAGTTTTTGCCATCTGCCGCGGTTTTCAGTTGTTGAATGTGGCCTATGGCGGCACGCTCTATCAAGATTTACCCT
CGCAGTATCAGCCAAATCTCAACCACGATGAATCGTTTACCCGCCAACAACGCGATTTGCCAGCCCACGGCTTACGCCTC
GCCAATGATTCCAAATTGGCTGAATTGCTGGGCACAACGCCCTTTGCCGTCAACACCATGCATCATCAAGGGGTCAAAGA
TCTGGGGAATGAGCTACAGGCAGTCGGTTGGTCGGATGATGGCCTAATCGAAGCGGTCGAAGATCCGCAGCGGCCATGGG
TTGTGGGCGTGCAATGCCACCCCGAAGAAATGGTGCGCGGCGAGGATTTGCGCTGGCAGGCAATTTTCAAGGCCTTTGTT
GAAGCTGCCAAAGCATGTCGCAACGAGGCGATTCAGGCATGA

Upstream 100 bases:

>100_bases
CAAAAATTCTGGGCGTAATCTGGTTATCAGCGTCCCATAATCGTCAGGTTTTTTGCGGTCGTGCTAGAATGGCAAGAGCA
ACACAACCAAGGAGTGTACT

Downstream 100 bases:

>100_bases
AAGACCAACCAATTGGCATGTTCGATTCAGGGGTTGGTGGCTTATCGACCTTGCGTGATCTGCGGGCACTTTTGCCGCAC
GAAGATATTATTTACTACGC

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPSTLPIIGIPCATYARPHPYPLAHGNNETYIRAVEVAGGVPLLIPLVQHEATLLAAFQAVDGLLFAGGVDLDPAYYSEE
PHPALGSVNREQDRVEMQLLAWAKQFHKPVFAICRGFQLLNVAYGGTLYQDLPSQYQPNLNHDESFTRQQRDLPAHGLRL
ANDSKLAELLGTTPFAVNTMHHQGVKDLGNELQAVGWSDDGLIEAVEDPQRPWVVGVQCHPEEMVRGEDLRWQAIFKAFV
EAAKACRNEAIQA

Sequences:

>Translated_253_residues
MPSTLPIIGIPCATYARPHPYPLAHGNNETYIRAVEVAGGVPLLIPLVQHEATLLAAFQAVDGLLFAGGVDLDPAYYSEE
PHPALGSVNREQDRVEMQLLAWAKQFHKPVFAICRGFQLLNVAYGGTLYQDLPSQYQPNLNHDESFTRQQRDLPAHGLRL
ANDSKLAELLGTTPFAVNTMHHQGVKDLGNELQAVGWSDDGLIEAVEDPQRPWVVGVQCHPEEMVRGEDLRWQAIFKAFV
EAAKACRNEAIQA
>Mature_252_residues
PSTLPIIGIPCATYARPHPYPLAHGNNETYIRAVEVAGGVPLLIPLVQHEATLLAAFQAVDGLLFAGGVDLDPAYYSEEP
HPALGSVNREQDRVEMQLLAWAKQFHKPVFAICRGFQLLNVAYGGTLYQDLPSQYQPNLNHDESFTRQQRDLPAHGLRLA
NDSKLAELLGTTPFAVNTMHHQGVKDLGNELQAVGWSDDGLIEAVEDPQRPWVVGVQCHPEEMVRGEDLRWQAIFKAFVE
AAKACRNEAIQA

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=249, Percent_Identity=31.7269076305221, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27936; Mature: 27805

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTLPIIGIPCATYARPHPYPLAHGNNETYIRAVEVAGGVPLLIPLVQHEATLLAAFQA
CCCCCCEEECCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
VDGLLFAGGVDLDPAYYSEEPHPALGSVNREQDRVEMQLLAWAKQFHKPVFAICRGFQLL
HHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NVAYGGTLYQDLPSQYQPNLNHDESFTRQQRDLPAHGLRLANDSKLAELLGTTPFAVNTM
HHHHCCHHHHHCHHHHCCCCCCCHHHHHHHHCCCHHCEEECCHHHHHHHHCCCCCEEECH
HHQGVKDLGNELQAVGWSDDGLIEAVEDPQRPWVVGVQCHPEEMVRGEDLRWQAIFKAFV
HHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHH
EAAKACRNEAIQA
HHHHHHHHHHCCC
>Mature Secondary Structure 
PSTLPIIGIPCATYARPHPYPLAHGNNETYIRAVEVAGGVPLLIPLVQHEATLLAAFQA
CCCCCEEECCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHHHHHHHHHHH
VDGLLFAGGVDLDPAYYSEEPHPALGSVNREQDRVEMQLLAWAKQFHKPVFAICRGFQLL
HHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
NVAYGGTLYQDLPSQYQPNLNHDESFTRQQRDLPAHGLRLANDSKLAELLGTTPFAVNTM
HHHHCCHHHHHCHHHHCCCCCCCHHHHHHHHCCCHHCEEECCHHHHHHHHCCCCCEEECH
HHQGVKDLGNELQAVGWSDDGLIEAVEDPQRPWVVGVQCHPEEMVRGEDLRWQAIFKAFV
HHHHHHHHHHHHEECCCCCCCCHHHCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHH
EAAKACRNEAIQA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]