| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900722
Identifier: 159900722
GI number: 159900722
Start: 5363041
End: 5363814
Strand: Direct
Name: 159900722
Synonym: Haur_4209
Alternate gene names: NA
Gene position: 5363041-5363814 (Clockwise)
Preceding gene: 159900717
Following gene: 159900730
Centisome position: 84.5
GC content: 49.74
Gene sequence:
>774_bases ATGAACAGCAAGGTTTTGCGCTTTGCCAATGTGGCAGCGATTATCGCGACGATTGTGATCAACGCCTTAGCCAATATTTT GCCGATCAACGGGCTTGATACTGGCACGATCTCCGATTCGTTTCCAGTGCGTTTCGTGCCAGCGGGCTATGTTTTCAGCA TTTGGGGCTTAATTTATTTGGGCCTTAGCGCCTTCGCAGTTTATCAAGCATTGCCTAAGCAGGCCAATAATCCAGCCATT GCTAAAATTGGCTGGTGGTTCGTGGCCTCATGTGGCTTCAATAGCGCTTGGATTTTCGCTTGGCACTATTTGCAATTCCC ACTCACAATCGTGTTAATTATTGGTTTGTTAGTTTCGCTGATTATGATTTATCGCCAGTTGAGCAGCGTTCGTGCTGAAG CTAGCACCGCTGATCGTTGGCTGATTCATACGCCGTTTTCCATTTACTTGGGTTGGGCTACGGTGGCAACCATCGCCAAT GCCACGATTGTGCTCTACGATGCTGGTTGGCGCGGCGGCCCACTCAGCGATTCAGTTTGGACGGTGATTTTGTTGGTAAT TGGGGTTTGTTTGGCAGCCTTCATTACCCTGCGCCAACGCGATATTGCCTATAATGGCGTGCTGTTGTGGGCGTTCATCG GCATTGCAGTTAAACAAGCAGCCTTCCCATTAGTGATGAATGCAGCAATTGTCGCGGCAGTTGCGATTGCCTTGTTGATT GGGCTGGCGCTCATTCGTAGCTTGCCAACGCAACGACGCAAAGCTATGGCGTAG
Upstream 100 bases:
>100_bases TACTCCACTCGGCGGGGGATGCCAATATCCATCCATTGGTCCGATCTTTGCGTTAAACCAATCAGAGCAAGCAGAATTTC AGTCAAATAAGGAGTCTCTG
Downstream 100 bases:
>100_bases CTGAAACCACAAAGAACACCAAGAGCACGAAGAAATCTTTGACATTGATTTTTCGTGCTCTTGGCGTTCTTAGCGGTTAC TAACTTTTTGGTAGATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI GLALIRSLPTQRRKAMA
Sequences:
>Translated_257_residues MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI GLALIRSLPTQRRKAMA >Mature_257_residues MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYLGLSAFAVYQALPKQANNPAI AKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSLIMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIAN ATIVLYDAGWRGGPLSDSVWTVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI GLALIRSLPTQRRKAMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27878; Mature: 27878
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH GLSAFAVYQALPKQANNPAIAKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSL HHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIANATIVLYDAGWRGGPLSDSVW HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHH TVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALIRSLPTQRRKAMA HHHHHHHCCHHHHHCCC >Mature Secondary Structure MNSKVLRFANVAAIIATIVINALANILPINGLDTGTISDSFPVRFVPAGYVFSIWGLIYL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHH GLSAFAVYQALPKQANNPAIAKIGWWFVASCGFNSAWIFAWHYLQFPLTIVLIIGLLVSL HHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IMIYRQLSSVRAEASTADRWLIHTPFSIYLGWATVATIANATIVLYDAGWRGGPLSDSVW HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHH TVILLVIGVCLAAFITLRQRDIAYNGVLLWAFIGIAVKQAAFPLVMNAAIVAAVAIALLI HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALIRSLPTQRRKAMA HHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA