| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900717
Identifier: 159900717
GI number: 159900717
Start: 5358357
End: 5358935
Strand: Direct
Name: 159900717
Synonym: Haur_4204
Alternate gene names: NA
Gene position: 5358357-5358935 (Clockwise)
Preceding gene: 159900716
Following gene: 159900722
Centisome position: 84.43
GC content: 55.44
Gene sequence:
>579_bases GTGATGCTGCGTCGCCCCTCTCAGCAACAACTGGTCGCTGTGCTGCGGGCGACGTTGCCTTTATTGCTGGCCGCCTTTTT GGGCGGCTTGTTGGCTTTAGCCCTCCAACCTGATCCACCCACTCAAACTATCATCCAAGTCGTTACCCCAACTGTGCTCA AGGCCGCTGCCACCGAAGTGCTGCCTGCCCCTGCCCCAACCCCGCTACCGGCCACGCCCACGGTTATCGTCTTCCCCGAA GATACGATTTCCTTGGAGTTGGTAACGTTGCGCCGCGATTTGGAGTTTACGGTTGGGAGTTTACACTTGTTACGGGCCAC CATCCGCATTCAAAATGCGCGGATCGCCCACCACGATTTGCAAACCAGCAATGTTGAAGCGCAACTTGATTTGGCCCAAG CCGATTTAGATGCAGCTTTTCCCCTCGTTAGCGATGAAGTTCGCGCGGCCATCCAAGGCCTCAACGAGCAAATTAACTAC TTACGCGACGATTTGGCAATTCGCCCCGAAACTATCGACTCGCGCCTCGCCGATTTAACCGAGCAAGTGCTGGTTTTGGC TAATCGCGATTTACCCTGA
Upstream 100 bases:
>100_bases CTTCCGCAAGATTCAGCAGTTGAGCATGAATACCCGCAAGTCGATGCGCGAAGTTGCCTCGGCCTTGCTGTTGGCCAACC AGATGGAGCAACAAAAGTAA
Downstream 100 bases:
>100_bases GTAAGAACATAGAACATAGAGGCGGGATTAGGAACTGATATTAACACAGAGGCGCAAGAATTATACAGATCGGCTTATTT GGTTACTTTGTGCTCTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MMLRRPSQQQLVAVLRATLPLLLAAFLGGLLALALQPDPPTQTIIQVVTPTVLKAAATEVLPAPAPTPLPATPTVIVFPE DTISLELVTLRRDLEFTVGSLHLLRATIRIQNARIAHHDLQTSNVEAQLDLAQADLDAAFPLVSDEVRAAIQGLNEQINY LRDDLAIRPETIDSRLADLTEQVLVLANRDLP
Sequences:
>Translated_192_residues MMLRRPSQQQLVAVLRATLPLLLAAFLGGLLALALQPDPPTQTIIQVVTPTVLKAAATEVLPAPAPTPLPATPTVIVFPE DTISLELVTLRRDLEFTVGSLHLLRATIRIQNARIAHHDLQTSNVEAQLDLAQADLDAAFPLVSDEVRAAIQGLNEQINY LRDDLAIRPETIDSRLADLTEQVLVLANRDLP >Mature_192_residues MMLRRPSQQQLVAVLRATLPLLLAAFLGGLLALALQPDPPTQTIIQVVTPTVLKAAATEVLPAPAPTPLPATPTVIVFPE DTISLELVTLRRDLEFTVGSLHLLRATIRIQNARIAHHDLQTSNVEAQLDLAQADLDAAFPLVSDEVRAAIQGLNEQINY LRDDLAIRPETIDSRLADLTEQVLVLANRDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20889; Mature: 20889
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRRPSQQQLVAVLRATLPLLLAAFLGGLLALALQPDPPTQTIIQVVTPTVLKAAATEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LPAPAPTPLPATPTVIVFPEDTISLELVTLRRDLEFTVGSLHLLRATIRIQNARIAHHDL CCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCEEHHHCC QTSNVEAQLDLAQADLDAAFPLVSDEVRAAIQGLNEQINYLRDDLAIRPETIDSRLADLT CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQVLVLANRDLP HHHHHHHCCCCC >Mature Secondary Structure MMLRRPSQQQLVAVLRATLPLLLAAFLGGLLALALQPDPPTQTIIQVVTPTVLKAAATEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LPAPAPTPLPATPTVIVFPEDTISLELVTLRRDLEFTVGSLHLLRATIRIQNARIAHHDL CCCCCCCCCCCCCEEEEECCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHCCCEEHHHCC QTSNVEAQLDLAQADLDAAFPLVSDEVRAAIQGLNEQINYLRDDLAIRPETIDSRLADLT CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EQVLVLANRDLP HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA