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The map label for this gene is 159900703

Identifier: 159900703

GI number: 159900703

Start: 5346268

End: 5347065

Strand: Direct

Name: 159900703

Synonym: Haur_4190

Alternate gene names: NA

Gene position: 5346268-5347065 (Clockwise)

Preceding gene: 159900702

Following gene: 159900704

Centisome position: 84.24

GC content: 51.75

Gene sequence:

>798_bases
ATGCCAAAGCGTTTGTTGGTCGTGGCGGTTGGAGTGAGTGTCTATGCCAATCCAGCGATTCCACCGTTGCCAACTTGCCG
TGATGATGCCCAAGTTTTTTTGAATGCGCTACGACCCTTGAGTACCCAGCCCTTGCTTGAGCGAGTTTTGTTTGATGATC
AAGCGACCAAAGCCAATATTCAGGTGACGCTGGAATGGTTGGCAGGCGAGGTCGCCGCTGATGATTTGGCGATTGTCTAT
TATTCAGGCCATGGAGCCAGCTTCGACGACGATAATGGTGACGAGAGCGATGGCAAAGAGGAGTTTTTATGTCCATATGA
ATGTGGTATGGAGCAAGGCGTAGGCAGTTTTGTGCGCGATGATGAACTGCGAGTTTGGCTAACTCCAATCCGTGAAAAAG
CCCCATTGTTGGTGGTACTCGACGCTTGCCATAGTGGCACAGGTGCAATGGCTCCAGCGGGCTTGATCGCCAAAGAATTA
CCAGCAGGCTTGGTTAAGCAAATTATTGGCAATGCCACGATTCCGGCTGGCGCTGGTGGCGATCCAATTCCGGCCAATCA
AGTGCTTTTGGCTGGCTGCCAAGATAGCGAACAATCCTACATTTTGCCTGGCGAGCCAAACTCGTTGTTCACGGCCAAGT
TGGTTGAGCAAATCGCCGCTGGCCAAACTGCTGATATTCAAAGCCTATTTGAGGCAACCTACAATGCCGTGCTCGATGCT
AGCGATGTGGCGGGCATTCAGCAAACCCCGAAGATTAGTAATGGGCTGAGTGCGCCGCTTGCGCTACGATCAGCCTAA

Upstream 100 bases:

>100_bases
TAAGCAAAAAATGCTGGCCCAGCCCAATAAACCACATTTAGTCCATCCATTTTATTGGGCCGCTTTTATTCCAATTGGAA
AGCGTTAGAAGGAGCAATCT

Downstream 100 bases:

>100_bases
CCCGAATATCCCCTCTACGGGGTACTTAAAACAGGACAAACAACAAGGCAAATAATTGACAAAGGGGGGATAATAAAGCG
AATCTAGATAGCTAAGGAAT

Product: peptidase C14 caspase catalytic subunit p20

Products: NA

Alternate protein names: Metacaspase; WD Repeat-Containing Protein

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPKRLLVVAVGVSVYANPAIPPLPTCRDDAQVFLNALRPLSTQPLLERVLFDDQATKANIQVTLEWLAGEVAADDLAIVY
YSGHGASFDDDNGDESDGKEEFLCPYECGMEQGVGSFVRDDELRVWLTPIREKAPLLVVLDACHSGTGAMAPAGLIAKEL
PAGLVKQIIGNATIPAGAGGDPIPANQVLLAGCQDSEQSYILPGEPNSLFTAKLVEQIAAGQTADIQSLFEATYNAVLDA
SDVAGIQQTPKISNGLSAPLALRSA

Sequences:

>Translated_265_residues
MPKRLLVVAVGVSVYANPAIPPLPTCRDDAQVFLNALRPLSTQPLLERVLFDDQATKANIQVTLEWLAGEVAADDLAIVY
YSGHGASFDDDNGDESDGKEEFLCPYECGMEQGVGSFVRDDELRVWLTPIREKAPLLVVLDACHSGTGAMAPAGLIAKEL
PAGLVKQIIGNATIPAGAGGDPIPANQVLLAGCQDSEQSYILPGEPNSLFTAKLVEQIAAGQTADIQSLFEATYNAVLDA
SDVAGIQQTPKISNGLSAPLALRSA
>Mature_264_residues
PKRLLVVAVGVSVYANPAIPPLPTCRDDAQVFLNALRPLSTQPLLERVLFDDQATKANIQVTLEWLAGEVAADDLAIVYY
SGHGASFDDDNGDESDGKEEFLCPYECGMEQGVGSFVRDDELRVWLTPIREKAPLLVVLDACHSGTGAMAPAGLIAKELP
AGLVKQIIGNATIPAGAGGDPIPANQVLLAGCQDSEQSYILPGEPNSLFTAKLVEQIAAGQTADIQSLFEATYNAVLDAS
DVAGIQQTPKISNGLSAPLALRSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27884; Mature: 27753

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRLLVVAVGVSVYANPAIPPLPTCRDDAQVFLNALRPLSTQPLLERVLFDDQATKANI
CCCEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEE
QVTLEWLAGEVAADDLAIVYYSGHGASFDDDNGDESDGKEEFLCPYECGMEQGVGSFVRD
EEEEEEHHCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECHHHHCHHHCCCCHHCC
DELRVWLTPIREKAPLLVVLDACHSGTGAMAPAGLIAKELPAGLVKQIIGNATIPAGAGG
CCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
DPIPANQVLLAGCQDSEQSYILPGEPNSLFTAKLVEQIAAGQTADIQSLFEATYNAVLDA
CCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
SDVAGIQQTPKISNGLSAPLALRSA
HHHCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
PKRLLVVAVGVSVYANPAIPPLPTCRDDAQVFLNALRPLSTQPLLERVLFDDQATKANI
CCEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEE
QVTLEWLAGEVAADDLAIVYYSGHGASFDDDNGDESDGKEEFLCPYECGMEQGVGSFVRD
EEEEEEHHCHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECHHHHCHHHCCCCHHCC
DELRVWLTPIREKAPLLVVLDACHSGTGAMAPAGLIAKELPAGLVKQIIGNATIPAGAGG
CCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCC
DPIPANQVLLAGCQDSEQSYILPGEPNSLFTAKLVEQIAAGQTADIQSLFEATYNAVLDA
CCCCCCCEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
SDVAGIQQTPKISNGLSAPLALRSA
HHHCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA