| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900686
Identifier: 159900686
GI number: 159900686
Start: 5321385
End: 5321756
Strand: Reverse
Name: 159900686
Synonym: Haur_4173
Alternate gene names: NA
Gene position: 5321756-5321385 (Counterclockwise)
Preceding gene: 159900687
Following gene: 159900685
Centisome position: 83.85
GC content: 37.9
Gene sequence:
>372_bases ATGGAGCGGCAAGATTTACAAGCACGCACGAAAAAGTTTGCTCTGCATATTATTCAGTTAGTTAATTTCATTCCTAATTC ATTAGCAGGGCGAGTCTTAGCTCAACAAATTCTACGTTCAGGAACCTCTGTTGGAGCTAACTATCGTGAAGCTTGTCGTG CGCGTTCAGCGGCTGAATTTATTTCAAAAACCAATATCGCTTTACAAGAACTAGAAGAAACGCGTTATTGGCTCGAATTA CTGCAAGAATCAACCTTATTAGATCATCGTCAATGTCATCATCTCGTCGATGAAGTTCAGCAATTAATCGCTATTTTTGT TACTGTAATTAAACGTAAAAAACAACATTCTAATCTTGATCCTTCCGTTTAG
Upstream 100 bases:
>100_bases AGTCAAAAGGCGAAAGTCAAAAATCAAAATACGAACATGCATACTTGAGCGCCATAATTATCTTTATGCATGTTCGTATT TCCACAGCAGAGAGGCAGAA
Downstream 100 bases:
>100_bases CTTCATTCCTTCATTGTATTTTTAGCCCTCGCCTTTTGACTTTTGATTTTTGCCTTCTGACTTTCAAAGAGAGGTTCTAT GCCACTCAGCAACAACGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MERQDLQARTKKFALHIIQLVNFIPNSLAGRVLAQQILRSGTSVGANYREACRARSAAEFISKTNIALQELEETRYWLEL LQESTLLDHRQCHHLVDEVQQLIAIFVTVIKRKKQHSNLDPSV
Sequences:
>Translated_123_residues MERQDLQARTKKFALHIIQLVNFIPNSLAGRVLAQQILRSGTSVGANYREACRARSAAEFISKTNIALQELEETRYWLEL LQESTLLDHRQCHHLVDEVQQLIAIFVTVIKRKKQHSNLDPSV >Mature_123_residues MERQDLQARTKKFALHIIQLVNFIPNSLAGRVLAQQILRSGTSVGANYREACRARSAAEFISKTNIALQELEETRYWLEL LQESTLLDHRQCHHLVDEVQQLIAIFVTVIKRKKQHSNLDPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14149; Mature: 14149
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERQDLQARTKKFALHIIQLVNFIPNSLAGRVLAQQILRSGTSVGANYREACRARSAAEF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISKTNIALQELEETRYWLELLQESTLLDHRQCHHLVDEVQQLIAIFVTVIKRKKQHSNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSV CCC >Mature Secondary Structure MERQDLQARTKKFALHIIQLVNFIPNSLAGRVLAQQILRSGTSVGANYREACRARSAAEF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISKTNIALQELEETRYWLELLQESTLLDHRQCHHLVDEVQQLIAIFVTVIKRKKQHSNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA