Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is yeaH [C]

Identifier: 159900687

GI number: 159900687

Start: 5321859

End: 5322962

Strand: Reverse

Name: yeaH [C]

Synonym: Haur_4174

Alternate gene names: 159900687

Gene position: 5322962-5321859 (Counterclockwise)

Preceding gene: 159900688

Following gene: 159900686

Centisome position: 83.87

GC content: 51.18

Gene sequence:

>1104_bases
ATGCAACGAGTTGAACGTGATCTCAATCGCTTCCGCCAAATTGTGCGGGGCAAAATTAAGAAAGATCTGCGCAAATATAT
TTCCCATGGTGAGATGATTGGCCGCCAAGGCAAACGCTTGGTCTCGATTCCTGTGCCCTCAATCGACTTACCGCGCTTTC
GCTTTGGCAAAAATCAAGGTGGGGTGGGGCAGGGCGAGGGCGATAACGGCGATCCGATCGGGCGTGGCGATGGCTCGCAG
CCAGGCGCGGGCGAGGCAGGCGAGGATTCAGGCCAACATTCGCTTGATGTCGAAATGACCATCGAAGAACTGGCGCAGTT
GTTGGGCGAAGAACTGCAATTGCCCAATATTCAACCCAAAGGTAGCAAGAATATTATCTCGCAAAAAGATAAATATTCGG
GCATTACCAAGGTTGGCCCAAACTCGCTGCGCCACTTCAAACGCTCCTTCCGCGAAGCCCTCAAACGCCAAGTCGCCTCT
GGTCAGTACGATCCTGATGATCCGGTGGTGGTGCCAATTCGCGATGACATGCGCTTTCGCACCTGGAAAACCACCGAAAT
GCCCGAAAGCAACGCCGTGATCATCTACAGCATGGATGTTTCTGGCTCGATGGGCCAGGAGCAAAAGGAGCTGGTACGGG
TAACCGCATTTTGGATCGAAACGTGGCTCCGTTCCCAATACAAACATCTCGAAATGCGCTACATCGTGCACGACGCAGCG
GCCAAAGAAGTGACCCAAGACGTTTTCTATCGCATTCGCGAGGGTGGCGGAACCAAAATTTCGTCGGCCTATCGCTTGGT
GTTGAAACTGATCGAGGAGCATTATTCGCCCGACGAGTGGAATATTTATCCCTTCCATTTTTCCGATGGCGATAACTGGG
GCGGTGGCGATACCCGTGAGTGTGTTGAGCTACTGCGTAACCAAATTTTGCCCAAAGTCAATCTTTTCTGTTACGGCCAA
GTGCGTTCATTGTATGGATCAGGGCGTTTTGCCCATGATCTGAACGAAAATTTTCGAGCCAATGAAACCATGGTCGTTTC
CGAAATTGCCGATCGCGACGATATTTACAATGCAATCAAAGCCTTTTTAGGCAAAGGCAAATAG

Upstream 100 bases:

>100_bases
ATGCGACTCAGCGCAAGTAGGCTCGGACACAGCGAACGGGTTCAATGAGGCATCCGTTCGCTTGCGTGCGTTCCTTCCAC
TAACAATCAACGGTGAGCCT

Downstream 100 bases:

>100_bases
CAAGTCAAAAGGCGAAAGTCAAAAATCAAAATACGAACATGCATACTTGAGCGCCATAATTATCTTTATGCATGTTCGTA
TTTCCACAGCAGAGAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ
PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS
GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA
AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ
VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK

Sequences:

>Translated_367_residues
MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ
PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS
GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA
AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ
VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK
>Mature_367_residues
MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ
PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS
GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA
AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ
VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family [H]

Homologues:

Organism=Escherichia coli, GI1788084, Length=406, Percent_Identity=26.6009852216749, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014230
- InterPro:   IPR006698 [H]

Pfam domain/function: PF04285 DUF444 [H]

EC number: NA

Molecular weight: Translated: 41703; Mature: 41703

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCC
GVGQGEGDNGDPIGRGDGSQPGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
GSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVASGQYDPDDPVVVPIRDDMRFR
CCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE
TWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHH
CVELLRNQILPKVNLFCYGQVRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIK
HHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEHHHHHCHHHHHHHHH
AFLGKGK
HHHCCCC
>Mature Secondary Structure
MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCC
GVGQGEGDNGDPIGRGDGSQPGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC
GSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVASGQYDPDDPVVVPIRDDMRFR
CCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE
TWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA
EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHH
CVELLRNQILPKVNLFCYGQVRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIK
HHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEHHHHHCHHHHHHHHH
AFLGKGK
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA