| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yeaH [C]
Identifier: 159900687
GI number: 159900687
Start: 5321859
End: 5322962
Strand: Reverse
Name: yeaH [C]
Synonym: Haur_4174
Alternate gene names: 159900687
Gene position: 5322962-5321859 (Counterclockwise)
Preceding gene: 159900688
Following gene: 159900686
Centisome position: 83.87
GC content: 51.18
Gene sequence:
>1104_bases ATGCAACGAGTTGAACGTGATCTCAATCGCTTCCGCCAAATTGTGCGGGGCAAAATTAAGAAAGATCTGCGCAAATATAT TTCCCATGGTGAGATGATTGGCCGCCAAGGCAAACGCTTGGTCTCGATTCCTGTGCCCTCAATCGACTTACCGCGCTTTC GCTTTGGCAAAAATCAAGGTGGGGTGGGGCAGGGCGAGGGCGATAACGGCGATCCGATCGGGCGTGGCGATGGCTCGCAG CCAGGCGCGGGCGAGGCAGGCGAGGATTCAGGCCAACATTCGCTTGATGTCGAAATGACCATCGAAGAACTGGCGCAGTT GTTGGGCGAAGAACTGCAATTGCCCAATATTCAACCCAAAGGTAGCAAGAATATTATCTCGCAAAAAGATAAATATTCGG GCATTACCAAGGTTGGCCCAAACTCGCTGCGCCACTTCAAACGCTCCTTCCGCGAAGCCCTCAAACGCCAAGTCGCCTCT GGTCAGTACGATCCTGATGATCCGGTGGTGGTGCCAATTCGCGATGACATGCGCTTTCGCACCTGGAAAACCACCGAAAT GCCCGAAAGCAACGCCGTGATCATCTACAGCATGGATGTTTCTGGCTCGATGGGCCAGGAGCAAAAGGAGCTGGTACGGG TAACCGCATTTTGGATCGAAACGTGGCTCCGTTCCCAATACAAACATCTCGAAATGCGCTACATCGTGCACGACGCAGCG GCCAAAGAAGTGACCCAAGACGTTTTCTATCGCATTCGCGAGGGTGGCGGAACCAAAATTTCGTCGGCCTATCGCTTGGT GTTGAAACTGATCGAGGAGCATTATTCGCCCGACGAGTGGAATATTTATCCCTTCCATTTTTCCGATGGCGATAACTGGG GCGGTGGCGATACCCGTGAGTGTGTTGAGCTACTGCGTAACCAAATTTTGCCCAAAGTCAATCTTTTCTGTTACGGCCAA GTGCGTTCATTGTATGGATCAGGGCGTTTTGCCCATGATCTGAACGAAAATTTTCGAGCCAATGAAACCATGGTCGTTTC CGAAATTGCCGATCGCGACGATATTTACAATGCAATCAAAGCCTTTTTAGGCAAAGGCAAATAG
Upstream 100 bases:
>100_bases ATGCGACTCAGCGCAAGTAGGCTCGGACACAGCGAACGGGTTCAATGAGGCATCCGTTCGCTTGCGTGCGTTCCTTCCAC TAACAATCAACGGTGAGCCT
Downstream 100 bases:
>100_bases CAAGTCAAAAGGCGAAAGTCAAAAATCAAAATACGAACATGCATACTTGAGCGCCATAATTATCTTTATGCATGTTCGTA TTTCCACAGCAGAGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK
Sequences:
>Translated_367_residues MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK >Mature_367_residues MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQGGVGQGEGDNGDPIGRGDGSQ PGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPKGSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVAS GQYDPDDPVVVPIRDDMRFRTWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRECVELLRNQILPKVNLFCYGQ VRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIKAFLGKGK
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=406, Percent_Identity=26.6009852216749, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 41703; Mature: 41703
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCC GVGQGEGDNGDPIGRGDGSQPGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC GSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVASGQYDPDDPVVVPIRDDMRFR CCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE TWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHH CVELLRNQILPKVNLFCYGQVRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIK HHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEHHHHHCHHHHHHHHH AFLGKGK HHHCCCC >Mature Secondary Structure MQRVERDLNRFRQIVRGKIKKDLRKYISHGEMIGRQGKRLVSIPVPSIDLPRFRFGKNQG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCCCC GVGQGEGDNGDPIGRGDGSQPGAGEAGEDSGQHSLDVEMTIEELAQLLGEELQLPNIQPK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC GSKNIISQKDKYSGITKVGPNSLRHFKRSFREALKRQVASGQYDPDDPVVVPIRDDMRFR CCCCHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE TWKTTEMPESNAVIIYSMDVSGSMGQEQKELVRVTAFWIETWLRSQYKHLEMRYIVHDAA EEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKEVTQDVFYRIREGGGTKISSAYRLVLKLIEEHYSPDEWNIYPFHFSDGDNWGGGDTRE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHH CVELLRNQILPKVNLFCYGQVRSLYGSGRFAHDLNENFRANETMVVSEIADRDDIYNAIK HHHHHHHHCCCCCEEEEEHHHHHHHCCCCCHHHCCCCCCCCCEEEHHHHHCHHHHHHHHH AFLGKGK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA