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The map label for this gene is spoVR [H]

Identifier: 159900685

GI number: 159900685

Start: 5319804

End: 5321306

Strand: Reverse

Name: spoVR [H]

Synonym: Haur_4172

Alternate gene names: 159900685

Gene position: 5321306-5319804 (Counterclockwise)

Preceding gene: 159900686

Following gene: 159900684

Centisome position: 83.85

GC content: 45.24

Gene sequence:

>1503_bases
ATGCCACTCAGCAACAACGATTTACCCCTCAACTTACAAAAAGCCTGGGAGCAAATTGATGGTCATGCCAAACGTTATGG
CCTCGATTACTACCCAATTGTTTATCAGATCCTTGATTATAATACACTGTACGAAGTTGCTGCAATGGGTGGATTTCCAA
CGCGCTACCCGCATTGGCGCTTCGGAATGGAGTATGATCAATTAATCAAGGGCCATGTGTATGGATTAAGCATCATTTAT
GAAATGGTGATTAATACCAATCCAGTGTATGCCTATTTGCTCGAAGGTAATATGATTGTTGACCAGAAAACGGTAATGGC
GCACGTTGCCGGCCATGCCGATTTCTTCAAGAATAATATGTGGTTTGCGCCAACCAATCGTAAAATGCTCGACACCATGG
CCAACCATGCCGGACGAATACAACGCTACATCGATCGTTATGGCTACGAAACGGTTGAAGCATTTATTGATACTTGCTTA
TCAATTGAAAACTTGATCGATTATCATTCGCCATATATTAATCGCCCTGAAGCCCAAACTAGCCAGCCAATCGTTGAAGA
TGACGATATTGAAGTTGCCGAAGGCTTGCCGTTTGAACGTTCGTATATGAAGGATTTTATTAATCCACCGGAATTTTTGC
GCCAGCAACGCGAGAAACTCTTAGAAGAACAGCAAAAAATGCGTAAATTCCCTGAGAATCCGCAAAAAGATGTGCTGTTA
TTCTTGATGAATTATGCGCCGCTCGATCGTTGGCAGCATAATATTTTGGAAATTGTGCGCGACGAGGCCTATTACTTCGC
TCCCCAAGGCATGACTAAAATTATCAATGAAGGCTGGGCCAGCTTTTGGCATAGCCGAATTATGACCACTCATGCCGCCG
AAACCTCAGAAATTATCGATTTTGCCGACCATCATGCCGGAATTGTCGCAGCCCATCCAGGCCGACTAAACCCCTATCGT
TTGGGTTTGCTACTGCTGCGCGACATCGAAGATCGCTGGAATCGCGGGCGTTTTGGCAAGGATTGGGAGCAATGCGACGA
TATGCGCGAGAAGCGCGAATGGGATTTGAAGCTTGGCAAGGGTATGGAAAAAGTCTTTGAGGTGCGGCGCTTCCACAACG
ATATTACCTTTCTTGACGAGTTTCTTACACCTGAATTTTGTGTCGAGAACAAACTGTTTACCTTCAAACACAACAACGAC
ACCGATTTGTACGAAATCGTCAACCGCGATTTTGGGGCAATTAAATCGCAATTGCTCAGTGGGTTAACCAATTTCGGCCA
GCCCTATATTTATGTTGAGGATGGCAACTACAATAATCGGGGTGAATTGTATTTGCGCCACCGCCATGAAGGCAGCGATT
TGCGCATGGATTATGCCCGCGACACGCTCAAACATATTCATACAATCTGGACGCGTCCGGTCAATCTTGAAACCGTGCTT
GATGATAAAAAGCGCTTGCTGACGTTTGATGGGAAAGAATACAGCGAACGTCGCATCGATTAG

Upstream 100 bases:

>100_bases
TAATCTTGATCCTTCCGTTTAGCTTCATTCCTTCATTGTATTTTTAGCCCTCGCCTTTTGACTTTTGATTTTTGCCTTCT
GACTTTCAAAGAGAGGTTCT

Downstream 100 bases:

>100_bases
CCCGTTTAGTCCAGAGGCACAGAGCATTCATCGGTACGTTTTGCGTCTCTGGACTCCATGTTTCATCCTTCGTAAATCAT
GCTTTATGCGTATAATTTAG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MPLSNNDLPLNLQKAWEQIDGHAKRYGLDYYPIVYQILDYNTLYEVAAMGGFPTRYPHWRFGMEYDQLIKGHVYGLSIIY
EMVINTNPVYAYLLEGNMIVDQKTVMAHVAGHADFFKNNMWFAPTNRKMLDTMANHAGRIQRYIDRYGYETVEAFIDTCL
SIENLIDYHSPYINRPEAQTSQPIVEDDDIEVAEGLPFERSYMKDFINPPEFLRQQREKLLEEQQKMRKFPENPQKDVLL
FLMNYAPLDRWQHNILEIVRDEAYYFAPQGMTKIINEGWASFWHSRIMTTHAAETSEIIDFADHHAGIVAAHPGRLNPYR
LGLLLLRDIEDRWNRGRFGKDWEQCDDMREKREWDLKLGKGMEKVFEVRRFHNDITFLDEFLTPEFCVENKLFTFKHNND
TDLYEIVNRDFGAIKSQLLSGLTNFGQPYIYVEDGNYNNRGELYLRHRHEGSDLRMDYARDTLKHIHTIWTRPVNLETVL
DDKKRLLTFDGKEYSERRID

Sequences:

>Translated_500_residues
MPLSNNDLPLNLQKAWEQIDGHAKRYGLDYYPIVYQILDYNTLYEVAAMGGFPTRYPHWRFGMEYDQLIKGHVYGLSIIY
EMVINTNPVYAYLLEGNMIVDQKTVMAHVAGHADFFKNNMWFAPTNRKMLDTMANHAGRIQRYIDRYGYETVEAFIDTCL
SIENLIDYHSPYINRPEAQTSQPIVEDDDIEVAEGLPFERSYMKDFINPPEFLRQQREKLLEEQQKMRKFPENPQKDVLL
FLMNYAPLDRWQHNILEIVRDEAYYFAPQGMTKIINEGWASFWHSRIMTTHAAETSEIIDFADHHAGIVAAHPGRLNPYR
LGLLLLRDIEDRWNRGRFGKDWEQCDDMREKREWDLKLGKGMEKVFEVRRFHNDITFLDEFLTPEFCVENKLFTFKHNND
TDLYEIVNRDFGAIKSQLLSGLTNFGQPYIYVEDGNYNNRGELYLRHRHEGSDLRMDYARDTLKHIHTIWTRPVNLETVL
DDKKRLLTFDGKEYSERRID
>Mature_499_residues
PLSNNDLPLNLQKAWEQIDGHAKRYGLDYYPIVYQILDYNTLYEVAAMGGFPTRYPHWRFGMEYDQLIKGHVYGLSIIYE
MVINTNPVYAYLLEGNMIVDQKTVMAHVAGHADFFKNNMWFAPTNRKMLDTMANHAGRIQRYIDRYGYETVEAFIDTCLS
IENLIDYHSPYINRPEAQTSQPIVEDDDIEVAEGLPFERSYMKDFINPPEFLRQQREKLLEEQQKMRKFPENPQKDVLLF
LMNYAPLDRWQHNILEIVRDEAYYFAPQGMTKIINEGWASFWHSRIMTTHAAETSEIIDFADHHAGIVAAHPGRLNPYRL
GLLLLRDIEDRWNRGRFGKDWEQCDDMREKREWDLKLGKGMEKVFEVRRFHNDITFLDEFLTPEFCVENKLFTFKHNNDT
DLYEIVNRDFGAIKSQLLSGLTNFGQPYIYVEDGNYNNRGELYLRHRHEGSDLRMDYARDTLKHIHTIWTRPVNLETVLD
DKKRLLTFDGKEYSERRID

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=496, Percent_Identity=29.6370967741936, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59295; Mature: 59164

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSNNDLPLNLQKAWEQIDGHAKRYGLDYYPIVYQILDYNTLYEVAAMGGFPTRYPHWR
CCCCCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
FGMEYDQLIKGHVYGLSIIYEMVINTNPVYAYLLEGNMIVDQKTVMAHVAGHADFFKNNM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECHHHHHHHHHHHHHHHHCCC
WFAPTNRKMLDTMANHAGRIQRYIDRYGYETVEAFIDTCLSIENLIDYHSPYINRPEAQT
EECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SQPIVEDDDIEVAEGLPFERSYMKDFINPPEFLRQQREKLLEEQQKMRKFPENPQKDVLL
CCCCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLMNYAPLDRWQHNILEIVRDEAYYFAPQGMTKIINEGWASFWHSRIMTTHAAETSEIID
HHHHCCCHHHHHHHHHHHHHHCHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FADHHAGIVAAHPGRLNPYRLGLLLLRDIEDRWNRGRFGKDWEQCDDMREKREWDLKLGK
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
GMEKVFEVRRFHNDITFLDEFLTPEFCVENKLFTFKHNNDTDLYEIVNRDFGAIKSQLLS
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCHHHHHHHCHHHHHHHHHHH
GLTNFGQPYIYVEDGNYNNRGELYLRHRHEGSDLRMDYARDTLKHIHTIWTRPVNLETVL
HHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
DDKKRLLTFDGKEYSERRID
CCCHHEEEECCCHHHHCCCC
>Mature Secondary Structure 
PLSNNDLPLNLQKAWEQIDGHAKRYGLDYYPIVYQILDYNTLYEVAAMGGFPTRYPHWR
CCCCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
FGMEYDQLIKGHVYGLSIIYEMVINTNPVYAYLLEGNMIVDQKTVMAHVAGHADFFKNNM
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEECHHHHHHHHHHHHHHHHCCC
WFAPTNRKMLDTMANHAGRIQRYIDRYGYETVEAFIDTCLSIENLIDYHSPYINRPEAQT
EECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SQPIVEDDDIEVAEGLPFERSYMKDFINPPEFLRQQREKLLEEQQKMRKFPENPQKDVLL
CCCCCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FLMNYAPLDRWQHNILEIVRDEAYYFAPQGMTKIINEGWASFWHSRIMTTHAAETSEIID
HHHHCCCHHHHHHHHHHHHHHCHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FADHHAGIVAAHPGRLNPYRLGLLLLRDIEDRWNRGRFGKDWEQCDDMREKREWDLKLGK
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
GMEKVFEVRRFHNDITFLDEFLTPEFCVENKLFTFKHNNDTDLYEIVNRDFGAIKSQLLS
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCHHHHHHHCHHHHHHHHHHH
GLTNFGQPYIYVEDGNYNNRGELYLRHRHEGSDLRMDYARDTLKHIHTIWTRPVNLETVL
HHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
DDKKRLLTFDGKEYSERRID
CCCHHEEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]