Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900684

Identifier: 159900684

GI number: 159900684

Start: 5319099

End: 5319614

Strand: Reverse

Name: 159900684

Synonym: Haur_4171

Alternate gene names: NA

Gene position: 5319614-5319099 (Counterclockwise)

Preceding gene: 159900685

Following gene: 159900683

Centisome position: 83.82

GC content: 48.45

Gene sequence:

>516_bases
ATGAGTCAATTTGATGATCAAGATGCGATCACCGTCGTCAATTTACAAGCACGGATCGCTGCTGGTTGGCAAGAACTGCA
AACATTTTTGCAAGGCTTGAGCCACACCCAATTAACTAACCCAACCGATGCCGCAGGCTGGACAATCAAAGATCATGCGA
TTCACTTGGCACTGTGGGAAAACAGCTTGTTGGCCTTGCTCAAGGCTGAATCTCGCGCTGCTAGCTTTGGGCTTGATGAG
GCAGTTTGGCAACAAGGCTACGAGGCAGTTAACCGCATTCTACAACAACGATACCACGATCTTCCTCTTGATCAAGTGTT
TGCCACCCTCGAAACCAACCACCAAACCCTGCTGGCCTATATCAGCCAACTGAGCGATAGCGATTTAATGCGTCCGCATC
GTGAGTTCCAAGCTGGCTCAACCAACGATGAGCCGATTATTGGCTGGATTGTGGGTAATACCTTTGAACATTATGCCGAG
CATTTACCATGGATGCAGGCGATTCTTGATAGCTAA

Upstream 100 bases:

>100_bases
GTATAATTTAGCTTATTCGTGCTAAAGAATGAGGTTTTTTGGCCGAATCCTGCTATGCTAGAAATACCATAGAGTGGTAG
TTCACTGGAAGGAATCGACC

Downstream 100 bases:

>100_bases
GCTAGCCATACCACAGCTATATTTTAGTTGGAAGGAATGAACTATGAGCCAATCTGACGCTCAAACTCCGATGACTGCGC
TCAATTTACAAGCACGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSQFDDQDAITVVNLQARIAAGWQELQTFLQGLSHTQLTNPTDAAGWTIKDHAIHLALWENSLLALLKAESRAASFGLDE
AVWQQGYEAVNRILQQRYHDLPLDQVFATLETNHQTLLAYISQLSDSDLMRPHREFQAGSTNDEPIIGWIVGNTFEHYAE
HLPWMQAILDS

Sequences:

>Translated_171_residues
MSQFDDQDAITVVNLQARIAAGWQELQTFLQGLSHTQLTNPTDAAGWTIKDHAIHLALWENSLLALLKAESRAASFGLDE
AVWQQGYEAVNRILQQRYHDLPLDQVFATLETNHQTLLAYISQLSDSDLMRPHREFQAGSTNDEPIIGWIVGNTFEHYAE
HLPWMQAILDS
>Mature_170_residues
SQFDDQDAITVVNLQARIAAGWQELQTFLQGLSHTQLTNPTDAAGWTIKDHAIHLALWENSLLALLKAESRAASFGLDEA
VWQQGYEAVNRILQQRYHDLPLDQVFATLETNHQTLLAYISQLSDSDLMRPHREFQAGSTNDEPIIGWIVGNTFEHYAEH
LPWMQAILDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19368; Mature: 19237

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFDDQDAITVVNLQARIAAGWQELQTFLQGLSHTQLTNPTDAAGWTIKDHAIHLALWE
CCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEHH
NSLLALLKAESRAASFGLDEAVWQQGYEAVNRILQQRYHDLPLDQVFATLETNHQTLLAY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
ISQLSDSDLMRPHREFQAGSTNDEPIIGWIVGNTFEHYAEHLPWMQAILDS
HHHHCCCHHHCHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure 
SQFDDQDAITVVNLQARIAAGWQELQTFLQGLSHTQLTNPTDAAGWTIKDHAIHLALWE
CCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEEEHH
NSLLALLKAESRAASFGLDEAVWQQGYEAVNRILQQRYHDLPLDQVFATLETNHQTLLAY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
ISQLSDSDLMRPHREFQAGSTNDEPIIGWIVGNTFEHYAEHLPWMQAILDS
HHHHCCCHHHCHHHHHCCCCCCCCCEEEEEECCHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA