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The map label for this gene is yghX [H]

Identifier: 159900649

GI number: 159900649

Start: 5282920

End: 5283894

Strand: Reverse

Name: yghX [H]

Synonym: Haur_4136

Alternate gene names: 159900649

Gene position: 5283894-5282920 (Counterclockwise)

Preceding gene: 159900650

Following gene: 159900648

Centisome position: 83.26

GC content: 54.36

Gene sequence:

>975_bases
ATGAATCATTTACAACAGTATCTGGTCGATGAGTTCGTCGAGGATTATCAAGAAGGGCTGATTAGTCGGCGGCAGGCCTT
GAAGAAAATCGCAGGTATTACGGGACTAGTGGTAGCAACCCAGTTGTTGGCAGCCTGTGGCGATCCTGCTACGCCTGCAA
CGGCAACCAGTGCCCCCAACCCAACTACCGCGCCAACTGCCACGACTGCCGCTGCAACTGAAGCCACGCCAACCACCGCC
AGTACAGGCGGCAGCGTGCCCAACAGCGTGGCCGAAAATGATCCAGCGATCAAAGCGGCAATGGTGGAGTTTGCTGGCGG
CGACGGTCAGTTAATGGCCTATCTGGCGCAGCCGGTTGGTGATGGTGCATTTCCAGTTGTGTTGGTTTGCCACGAAAACC
GTGGGCTTACGCCGCACATTCAAGATGTTGCGCGACGGGTCGCCAAGGCTGGCTATATTGGCTTAGCTGTCGATTTGCTC
TCGCGTGAAGGCGGCACGGCCAGCATTACCGACGCTGATAGTGTGCCTGGCTTGCTCAGCGGTGCACCACCCGAGCGCCA
TGTAGCCGATTTCAAGGCCGGAGTCGAGTATCTCAAAACCCAGTCGTTTGCCGACACCAGCAACATTGGCATGGTTGGGT
TTTGCTTTGGTGGTGGGGTTACCTGGTTGGTTGCGGCGGGCATGCCCGAATTAAAAGCCGCCGTGCCATTTTACGGCCCA
CCAGTGCCAAGCAGCGAAATTCCCAAAATCAATGCCCCAGTTTTGGCAATTTACGCCGAACAGGATGATCGAATTACCAG
CACGGTAGCTGAGGTTGAAGCAGCAATGCAACAAAACAACAAAGTCTATCGCAAAGAAATTTATCCTGGGGTCAATCACG
CTTTTCATAATGATACTGGACAGCGGTATAATGCAGAGGCTGCCCAAGCGGCGTGGGCTGAAACGCTGGCTTGGTTTAAG
CAATATTTGGTCTAG

Upstream 100 bases:

>100_bases
TAGTAAATGAAATTAATAAATCCTCATTTTTCAAGCCATCCGTTAAGGCCAAACCAGGCGTAGACTGAGCTATGGACTGA
AATTCATGTGAGGATGAACG

Downstream 100 bases:

>100_bases
TCGATAGCATCCAGCAGCTTTTTCTGCTCGCACTCATCGACGACGATGGGTGCTTTTTGATCGGCTAAAATAAGGCTTTT
CGGCTATACTGCCGCTAGAT

Product: carboxymethylenebutenolidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNHLQQYLVDEFVEDYQEGLISRRQALKKIAGITGLVVATQLLAACGDPATPATATSAPNPTTAPTATTAAATEATPTTA
STGGSVPNSVAENDPAIKAAMVEFAGGDGQLMAYLAQPVGDGAFPVVLVCHENRGLTPHIQDVARRVAKAGYIGLAVDLL
SREGGTASITDADSVPGLLSGAPPERHVADFKAGVEYLKTQSFADTSNIGMVGFCFGGGVTWLVAAGMPELKAAVPFYGP
PVPSSEIPKINAPVLAIYAEQDDRITSTVAEVEAAMQQNNKVYRKEIYPGVNHAFHNDTGQRYNAEAAQAAWAETLAWFK
QYLV

Sequences:

>Translated_324_residues
MNHLQQYLVDEFVEDYQEGLISRRQALKKIAGITGLVVATQLLAACGDPATPATATSAPNPTTAPTATTAAATEATPTTA
STGGSVPNSVAENDPAIKAAMVEFAGGDGQLMAYLAQPVGDGAFPVVLVCHENRGLTPHIQDVARRVAKAGYIGLAVDLL
SREGGTASITDADSVPGLLSGAPPERHVADFKAGVEYLKTQSFADTSNIGMVGFCFGGGVTWLVAAGMPELKAAVPFYGP
PVPSSEIPKINAPVLAIYAEQDDRITSTVAEVEAAMQQNNKVYRKEIYPGVNHAFHNDTGQRYNAEAAQAAWAETLAWFK
QYLV
>Mature_324_residues
MNHLQQYLVDEFVEDYQEGLISRRQALKKIAGITGLVVATQLLAACGDPATPATATSAPNPTTAPTATTAAATEATPTTA
STGGSVPNSVAENDPAIKAAMVEFAGGDGQLMAYLAQPVGDGAFPVVLVCHENRGLTPHIQDVARRVAKAGYIGLAVDLL
SREGGTASITDADSVPGLLSGAPPERHVADFKAGVEYLKTQSFADTSNIGMVGFCFGGGVTWLVAAGMPELKAAVPFYGP
PVPSSEIPKINAPVLAIYAEQDDRITSTVAEVEAAMQQNNKVYRKEIYPGVNHAFHNDTGQRYNAEAAQAAWAETLAWFK
QYLV

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994982, Length=245, Percent_Identity=35.5102040816327, Blast_Score=136, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17536419, Length=193, Percent_Identity=32.1243523316062, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17532655, Length=227, Percent_Identity=26.431718061674, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 33990; Mature: 33990

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLQQYLVDEFVEDYQEGLISRRQALKKIAGITGLVVATQLLAACGDPATPATATSAPN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PTTAPTATTAAATEATPTTASTGGSVPNSVAENDPAIKAAMVEFAGGDGQLMAYLAQPVG
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
DGAFPVVLVCHENRGLTPHIQDVARRVAKAGYIGLAVDLLSREGGTASITDADSVPGLLS
CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCCHHHC
GAPPERHVADFKAGVEYLKTQSFADTSNIGMVGFCFGGGVTWLVAAGMPELKAAVPFYGP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHCCCCCCC
PVPSSEIPKINAPVLAIYAEQDDRITSTVAEVEAAMQQNNKVYRKEIYPGVNHAFHNDTG
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHCCCCC
QRYNAEAAQAAWAETLAWFKQYLV
CCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHLQQYLVDEFVEDYQEGLISRRQALKKIAGITGLVVATQLLAACGDPATPATATSAPN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PTTAPTATTAAATEATPTTASTGGSVPNSVAENDPAIKAAMVEFAGGDGQLMAYLAQPVG
CCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
DGAFPVVLVCHENRGLTPHIQDVARRVAKAGYIGLAVDLLSREGGTASITDADSVPGLLS
CCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCCCHHHC
GAPPERHVADFKAGVEYLKTQSFADTSNIGMVGFCFGGGVTWLVAAGMPELKAAVPFYGP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHCCCCCCC
PVPSSEIPKINAPVLAIYAEQDDRITSTVAEVEAAMQQNNKVYRKEIYPGVNHAFHNDTG
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHCCCCC
QRYNAEAAQAAWAETLAWFKQYLV
CCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]