| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900643
Identifier: 159900643
GI number: 159900643
Start: 5276589
End: 5276993
Strand: Reverse
Name: 159900643
Synonym: Haur_4130
Alternate gene names: NA
Gene position: 5276993-5276589 (Counterclockwise)
Preceding gene: 159900644
Following gene: 159900642
Centisome position: 83.15
GC content: 49.38
Gene sequence:
>405_bases GTGTTTTGGCATATTATCAAAAATGCCAGAAATCCCAATCGCTACCAATCGAATGTGTATTCGAATCGTCGGCATAATCG CCGACATCATGCTTCGTTTCATCAGCGCCATATGCACCCGTCATTGCATCAGCATCCATCGTTGCAGCATCACCAGCAGC ATCACTTTGATTCCGATGATCTCGCGGCTGGGATTGGTATCGCAGCAGGCATGCACGTTGCTCAATCATGGGACTCCAAT AATTCAGGTTGGGATAGTTCATCCAGCTTTGATAGCGGTTCCTGGTCGAACAACGATTCTGGTAGCTCATGGTCAAGCGG CGATTCGGGCGGCTCATGGTCAAGCGATTCGAGTAGTTCGTCTAGCTCGGATAGTTTCAGCGGCGATTCAAGCGGTTCTT GGTAA
Upstream 100 bases:
>100_bases CAAGGAGAGAAATTCGATGGACTCATTTGAAATAGTATCAACGATCATGTCGATCTTTACACTAGTGTTTTTTCTTTTCG TATTTTCGATATTTGGCTTT
Downstream 100 bases:
>100_bases TACGCGATGAATGGATTTATGATAGTAATCGGCCTTAGCTTGGCACTCGTGCTGTCTTTGCTCAGTATAATGTTGCTCGG TCGTCTTCGATCGGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW
Sequences:
>Translated_134_residues MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW >Mature_134_residues MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDDLAAGIGIAAGMHVAQSWDSN NSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSSSSSDSFSGDSSGSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14851; Mature: 14851
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDD CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCHH LAAGIGIAAGMHVAQSWDSNNSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSDSFSGDSSGSW CCCCCCCCCCCCCC >Mature Secondary Structure MFWHIIKNARNPNRYQSNVYSNRRHNRRHHASFHQRHMHPSLHQHPSLQHHQQHHFDSDD CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCHH LAAGIGIAAGMHVAQSWDSNNSGWDSSSSFDSGSWSNNDSGSSWSSGDSGGSWSSDSSSS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSSDSFSGDSSGSW CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA