Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900642

Identifier: 159900642

GI number: 159900642

Start: 5276133

End: 5276495

Strand: Reverse

Name: 159900642

Synonym: Haur_4129

Alternate gene names: NA

Gene position: 5276495-5276133 (Counterclockwise)

Preceding gene: 159900643

Following gene: 159900641

Centisome position: 83.14

GC content: 48.21

Gene sequence:

>363_bases
GTGCGGCCAGCCAAAACTAAGCAACGCCGAATCCATCAATCCTATCCCTATTCAGCGCCGAACCCTAAAAGCAATAAAGC
CAAACGTCGGGCTAAAGCACAACACAACAAACGTAATAAAGTGTATTCGAGCCAAATCCAACCGGATCAAGCCCAACATT
CGCTCAATAATTCAGCCAGTAACGATCAATCCACGGCTGCCTCCTATGCAAGTTCGAGTAATGATTCGGCGTGGTCGGCA
AGCTACGATTATTCACAATCAACCTATGATTCGTCCTCAAGTGGCGATTCGGCTGGCTCTTGGTCAAGCGATTCGAGTAG
TTCATCGGATAGTAACAGTGGCGATTCAAGTGGCTCGTGGTGA

Upstream 100 bases:

>100_bases
TTGGTAATACGCGATGAATGGATTTATGATAGTAATCGGCCTTAGCTTGGCACTCGTGCTGTCTTTGCTCAGTATAATGT
TGCTCGGTCGTCTTCGATCG

Downstream 100 bases:

>100_bases
GAGGATTTAACATGATTTTACAAAAACTTGCTCCACATAAACCAACCGTGATCGTTTGGCTTAGTTCACTAGCCTTGATC
AGTATGCAGTTGCTCTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRPAKTKQRRIHQSYPYSAPNPKSNKAKRRAKAQHNKRNKVYSSQIQPDQAQHSLNNSASNDQSTAASYASSSNDSAWSA
SYDYSQSTYDSSSSGDSAGSWSSDSSSSSDSNSGDSSGSW

Sequences:

>Translated_120_residues
MRPAKTKQRRIHQSYPYSAPNPKSNKAKRRAKAQHNKRNKVYSSQIQPDQAQHSLNNSASNDQSTAASYASSSNDSAWSA
SYDYSQSTYDSSSSGDSAGSWSSDSSSSSDSNSGDSSGSW
>Mature_120_residues
MRPAKTKQRRIHQSYPYSAPNPKSNKAKRRAKAQHNKRNKVYSSQIQPDQAQHSLNNSASNDQSTAASYASSSNDSAWSA
SYDYSQSTYDSSSSGDSAGSWSSDSSSSSDSNSGDSSGSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12954; Mature: 12954

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAKTKQRRIHQSYPYSAPNPKSNKAKRRAKAQHNKRNKVYSSQIQPDQAQHSLNNSAS
CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
NDQSTAASYASSSNDSAWSASYDYSQSTYDSSSSGDSAGSWSSDSSSSSDSNSGDSSGSW
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPAKTKQRRIHQSYPYSAPNPKSNKAKRRAKAQHNKRNKVYSSQIQPDQAQHSLNNSAS
CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
NDQSTAASYASSSNDSAWSASYDYSQSTYDSSSSGDSAGSWSSDSSSSSDSNSGDSSGSW
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA